Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY25719 | Canola | cytosol | 80.21 | 92.12 |
| CDY02510 | Canola | cytosol | 77.31 | 91.28 |
| CDY45927 | Canola | cytosol, plastid | 86.28 | 87.2 |
| CDY25863 | Canola | cytosol, mitochondrion | 86.28 | 86.74 |
| Bra041095.1-P | Field mustard | cytosol, mitochondrion | 86.28 | 86.74 |
| Bra030942.1-P | Field mustard | mitochondrion | 88.92 | 85.97 |
| GSMUA_Achr7P25250_001 | Banana | cytosol | 62.53 | 74.53 |
| GSMUA_Achr3P31460_001 | Banana | cytosol | 61.74 | 73.12 |
| GSMUA_Achr4P01150_001 | Banana | cytosol | 61.48 | 73.04 |
| KRH27356 | Soybean | mitochondrion | 72.56 | 72.75 |
| KRH21960 | Soybean | mitochondrion | 73.09 | 72.7 |
| VIT_19s0014g01250.t01 | Wine grape | mitochondrion | 72.56 | 68.58 |
| Solyc07g062390.2.1 | Tomato | mitochondrion | 68.34 | 67.1 |
| PGSC0003DMT400018209 | Potato | mitochondrion | 68.07 | 66.84 |
| GSMUA_Achr7P13870_001 | Banana | mitochondrion, plastid | 50.66 | 65.08 |
| TraesCS3B01G304600.1 | Wheat | cytosol | 59.89 | 64.67 |
| TraesCS3D01G270500.1 | Wheat | cytosol | 59.89 | 63.94 |
| TraesCS3A01G270800.1 | Wheat | cytosol | 59.63 | 63.66 |
| HORVU3Hr1G061930.1 | Barley | cytosol | 59.1 | 62.92 |
| Os01t0674500-01 | Rice | cytosol | 58.84 | 62.64 |
| Zm00001d011578_P003 | Maize | nucleus | 58.84 | 62.29 |
| GSMUA_Achr4P10540_001 | Banana | mitochondrion | 62.8 | 61.98 |
| Os05t0560400-00 | Rice | cytosol | 57.52 | 61.93 |
| Os05t0514300-01 | Rice | mitochondrion | 60.42 | 61.56 |
| EES03425 | Sorghum | plastid | 58.31 | 61.39 |
| Zm00001d038691_P001 | Maize | mitochondrion | 58.58 | 60.49 |
| GSMUA_Achr10P... | Banana | mitochondrion | 58.84 | 60.27 |
| EES18499 | Sorghum | mitochondrion | 58.84 | 59.95 |
| TraesCS1A01G333900.1 | Wheat | mitochondrion | 57.78 | 58.71 |
| TraesCS1B01G347200.1 | Wheat | mitochondrion | 57.52 | 58.45 |
| TraesCS1D01G336400.1 | Wheat | mitochondrion | 57.78 | 58.24 |
| Zm00001d043895_P003 | Maize | cytosol | 55.41 | 55.56 |
| HORVU1Hr1G076900.1 | Barley | cytosol | 55.15 | 54.29 |
| OQU78419 | Sorghum | cytosol | 53.83 | 54.11 |
| Os01t0759100-01 | Rice | cytosol, plastid | 49.87 | 51.36 |
| AT2G47900.3 | Thale cress | cytosol | 49.34 | 45.95 |
| AT2G18280.2 | Thale cress | cytosol | 47.23 | 45.43 |
| AT3G06380.1 | Thale cress | mitochondrion | 45.38 | 45.26 |
| AT5G18680.1 | Thale cress | mitochondrion | 43.8 | 42.67 |
| AT1G25280.1 | Thale cress | cytosol | 48.55 | 41.35 |
| AT1G47270.1 | Thale cress | nucleus | 44.85 | 41.16 |
| AT1G76900.1 | Thale cress | cytosol | 48.81 | 40.66 |
| AT1G43640.1 | Thale cress | cytosol | 45.12 | 39.86 |
| HORVU0Hr1G001350.2 | Barley | cytosol | 32.72 | 33.24 |
| AT1G61940.2 | Thale cress | cytosol | 20.84 | 29.81 |
| AT1G16070.1 | Thale cress | nucleus | 19.79 | 18.89 |
Protein Annotations
| MapMan:15.5.21 | Gene3D:3.20.90.10 | EntrezGene:841766 | UniProt:A0A178WNG9 | ProteinID:AAF69545.1 | ProteinID:AEE32924.1 |
| EMBL:AF370146 | ArrayExpress:AT1G53320 | EnsemblPlantsGene:AT1G53320 | RefSeq:AT1G53320 | TAIR:AT1G53320 | RefSeq:AT1G53320-TAIR-G |
| EnsemblPlants:AT1G53320.1 | TAIR:AT1G53320.1 | EMBL:AY059088 | EMBL:AY092403 | Unigene:At.24299 | Symbol:AtTLP7 |
| InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0005886 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008289 | GO:GO:0009058 | GO:GO:0009536 | GO:GO:0009555 | GO:GO:0009605 |
| GO:GO:0009607 | GO:GO:0009620 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0035091 | GO:GO:0044212 |
| InterPro:IPR001810 | InterPro:IPR025659 | RefSeq:NP_564627.1 | ProteinID:OAP18642.1 | PFAM:PF00646 | PFAM:PF01167 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR01573 | ScanProsite:PS01200 |
| ScanProsite:PS01201 | PANTHER:PTHR16517 | PANTHER:PTHR16517:SF50 | UniProt:Q93VI8 | SUPFAM:SSF54518 | InterPro:Tubby-like_C |
| InterPro:Tubby_C | InterPro:Tubby_C_CS | UniParc:UPI000009D3D0 | SEG:seg | : | : |
Description
TULP7Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:A0A178WNG9]
Coordinates
chr1:-:19890935..19893504
Molecular Weight (calculated)
42180.1 Da
IEP (calculated)
10.089
GRAVY (calculated)
-0.489
Length
379 amino acids
Sequence
(BLAST)
(BLAST)
001: MPLSRSLLSR RISNSFRFHQ GETTTAPESE SIPPPSNMAG SSSWSAMLPE LLGEIIRRVE ETEDRWPQRR DVVTCACVSK KWREITHDFA RSSLNSGKIT
101: FPSCLKLPGP RDFSNQCLIK RNKKTSTFYL YLALTPSFTD KGKFLLAARR FRTGAYTEYI ISLDADDFSQ GSNAYVGKLR SDFLGTNFTV YDSQPPHNGA
201: KPSNGKASRR FASKQISPQV PAGNFEVGHV SYKFNLLKSR GPRRMVSTLR CPSPSPSSSS AGLSSDQKPC DVTKIMKKPN KDGSSLTILK NKAPRWHEHL
301: QCWCLNFHGR VTVASVKNFQ LVATVDQSQP SGKGDEETVL LQFGKVGDDT FTMDYRQPLS AFQAFAICLT SFGTKLACE
101: FPSCLKLPGP RDFSNQCLIK RNKKTSTFYL YLALTPSFTD KGKFLLAARR FRTGAYTEYI ISLDADDFSQ GSNAYVGKLR SDFLGTNFTV YDSQPPHNGA
201: KPSNGKASRR FASKQISPQV PAGNFEVGHV SYKFNLLKSR GPRRMVSTLR CPSPSPSSSS AGLSSDQKPC DVTKIMKKPN KDGSSLTILK NKAPRWHEHL
301: QCWCLNFHGR VTVASVKNFQ LVATVDQSQP SGKGDEETVL LQFGKVGDDT FTMDYRQPLS AFQAFAICLT SFGTKLACE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.