Factsheet for HORVU0Hr1G001350.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G076900.1	Barley	cytosol	49.87	48.31
HORVU5Hr1G023650.1	Barley	plastid	29.22	45.23
GSMUA_Achr7P25250_001	Banana	cytosol	35.12	41.2
GSMUA_Achr7P13870_001	Banana	mitochondrion, plastid	31.9	40.34
GSMUA_Achr4P01150_001	Banana	cytosol	33.51	39.19
GSMUA_Achr3P31460_001	Banana	cytosol	33.51	39.06
CDY02510	Canola	cytosol	32.44	37.69
CDY25719	Canola	cytosol	32.71	36.97
KRH27356	Soybean	mitochondrion	34.05	33.6
KRH21960	Soybean	mitochondrion	34.05	33.33
GSMUA_Achr4P10540_001	Banana	mitochondrion	34.05	33.07
AT1G53320.1	Thale cress	mitochondrion	33.24	32.72
HORVU3Hr1G061930.1	Barley	cytosol	31.1	32.58
CDY45927	Canola	cytosol, plastid	32.71	32.53
Solyc07g062390.2.1	Tomato	mitochondrion	33.51	32.38
PGSC0003DMT400018209	Potato	mitochondrion	33.51	32.38
CDY25863	Canola	cytosol, mitochondrion	32.71	32.36
Bra041095.1-P	Field mustard	cytosol, mitochondrion	32.71	32.36
Bra030942.1-P	Field mustard	mitochondrion	32.98	31.38
VIT_19s0014g01250.t01	Wine grape	mitochondrion	33.51	31.17
GSMUA_Achr10P...	Banana	mitochondrion	30.29	30.54
HORVU5Hr1G040000.2	Barley	cytosol	28.95	24.6
HORVU6Hr1G068970.3	Barley	cytosol	28.15	24.59
HORVU3Hr1G083290.1	Barley	mitochondrion	28.69	23.83
HORVU1Hr1G074940.3	Barley	cytosol, mitochondrion, nucleus, plastid	28.69	23.67
HORVU4Hr1G020110.3	Barley	cytosol, mitochondrion	27.61	23.41
HORVU2Hr1G124880.1	Barley	plastid	28.42	17.07
HORVU6Hr1G029710.3	Barley	plastid	11.53	10.89

Protein Annotations

EnsemblPlants:HORVU0Hr1G001350.2	EnsemblPlantsGene:HORVU0Hr1G001350	Gene3D:3.20.90.10	InterPro:IPR025659	InterPro:Tubby-like_C	InterPro:Tubby_C
InterPro:Tubby_C_CS	PANTHER:PTHR16517	PANTHER:PTHR16517:SF32	PFAM:PF01167	PRINTS:PR01573	ScanProsite:PS01200
ScanProsite:PS01201	SEG:seg	SUPFAM:SSF54518	UniParc:UPI000B4791D6	UniProt:A0A287DU97	MapMan:15.5.21

Description

Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:A0A287DU97]

Coordinates

chrchrUn:+:7314439..7315560

Molecular Weight (calculated)

21011.7 Da

IEP (calculated)

8.811

GRAVY (calculated)

-0.254

Length

373 amino acids

Sequence
(BLAST)

001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
101: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXSFRSD FLGTKFIMYD
201: NQKPYDGAKS LKSRSSRRFA TKQISPNDSG SNLEVGQVSY RFNFLKSRGP RRMHCSIQCP VDQGSASDPS KETPQSTSSS LSLKNKAPRW HDHLQCWCLN
301: FHGRVTVASV KNFQLVAPAG TSDPWGVGDE ETVILQFGKI EDDAFTMDFR YPLSAYQAFA ICLTSFGTKL ACE

Best Arabidopsis Sequence Match ( AT1G53320.1 )
(BLAST)

001: MPLSRSLLSR RISNSFRFHQ GETTTAPESE SIPPPSNMAG SSSWSAMLPE LLGEIIRRVE ETEDRWPQRR DVVTCACVSK KWREITHDFA RSSLNSGKIT
101: FPSCLKLPGP RDFSNQCLIK RNKKTSTFYL YLALTPSFTD KGKFLLAARR FRTGAYTEYI ISLDADDFSQ GSNAYVGKLR SDFLGTNFTV YDSQPPHNGA
201: KPSNGKASRR FASKQISPQV PAGNFEVGHV SYKFNLLKSR GPRRMVSTLR CPSPSPSSSS AGLSSDQKPC DVTKIMKKPN KDGSSLTILK NKAPRWHEHL
301: QCWCLNFHGR VTVASVKNFQ LVATVDQSQP SGKGDEETVL LQFGKVGDDT FTMDYRQPLS AFQAFAICLT SFGTKLACE

Arabidopsis Description

TULP7Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:A0A178WNG9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.