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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY25719 Canola cytosol 96.88 94.24
AT1G53320.1 Thale cress mitochondrion 91.28 77.31
CDY25863 Canola cytosol, mitochondrion 90.65 77.19
CDY45927 Canola cytosol, plastid 89.72 76.8
GSMUA_Achr7P25250_001 Banana cytosol 73.21 73.9
CDY13913 Canola endoplasmic reticulum, extracellular 6.85 73.33
GSMUA_Achr3P31460_001 Banana cytosol 71.65 71.88
GSMUA_Achr4P01150_001 Banana cytosol 71.34 71.79
KRH27356 Soybean mitochondrion 81.62 69.31
KRH21960 Soybean mitochondrion 81.62 68.77
CDY10578 Canola mitochondrion 8.72 66.67
VIT_19s0014g01250.t01 Wine grape mitochondrion 81.0 64.84
TraesCS3B01G304600.1 Wheat cytosol 70.41 64.39
TraesCS3D01G270500.1 Wheat cytosol 70.41 63.66
GSMUA_Achr7P13870_001 Banana mitochondrion, plastid 58.26 63.39
TraesCS3A01G270800.1 Wheat cytosol 70.09 63.38
HORVU3Hr1G061930.1 Barley cytosol 69.78 62.92
Os01t0674500-01 Rice cytosol 69.16 62.36
Zm00001d011578_P003 Maize nucleus 69.16 62.01
PGSC0003DMT400018209 Potato mitochondrion 73.83 61.4
EES03425 Sorghum plastid 68.85 61.39
Os05t0560400-00 Rice cytosol 66.98 61.08
Solyc07g062390.2.1 Tomato mitochondrion 73.21 60.88
GSMUA_Achr4P10540_001 Banana mitochondrion 71.03 59.38
GSMUA_Achr10P... Banana mitochondrion 67.91 58.92
Os05t0514300-01 Rice mitochondrion 67.29 58.06
Zm00001d038691_P001 Maize mitochondrion 66.04 57.77
EES18499 Sorghum mitochondrion 66.67 57.53
Zm00001d043895_P003 Maize cytosol 65.73 55.82
TraesCS1A01G333900.1 Wheat mitochondrion 64.8 55.76
TraesCS1B01G347200.1 Wheat mitochondrion 64.49 55.5
TraesCS1D01G336400.1 Wheat mitochondrion 64.8 55.32
HORVU1Hr1G076900.1 Barley cytosol 63.55 52.99
OQU78419 Sorghum cytosol 61.99 52.79
Os01t0759100-01 Rice cytosol, plastid 55.14 48.1
CDY24698 Canola mitochondrion 51.09 46.46
CDY25159 Canola cytosol 54.21 46.4
CDY46301 Canola cytosol 53.58 45.5
CDY05258 Canola mitochondrion 50.78 45.28
CDY27467 Canola cytosol 54.52 44.08
CDY55525 Canola cytosol 55.14 44.03
CDX92589 Canola mitochondrion 51.09 43.85
CDY36119 Canola cytosol 55.14 41.94
CDY13570 Canola cytosol 55.45 41.88
CDX84977 Canola cytosol 54.52 41.67
CDY51990 Canola cytosol 54.83 41.61
CDY45959 Canola cytosol 55.45 41.49
CDY42119 Canola cytosol 56.39 41.42
CDY65687 Canola cytosol, mitochondrion 47.98 41.18
CDY66464 Canola cytosol 54.52 40.79
CDY17028 Canola mitochondrion, nucleus 49.22 40.0
CDY65845 Canola cytosol, mitochondrion 55.45 39.56
CDY72036 Canola cytosol 54.52 39.5
CDX87562 Canola cytosol, mitochondrion 55.45 39.47
CDY17085 Canola cytosol, mitochondrion 48.29 39.34
CDY13914 Canola mitochondrion 29.59 38.93
HORVU0Hr1G001350.2 Barley cytosol 37.69 32.44
CDY06747 Canola cytosol, mitochondrion 47.66 26.47
CDY69989 Canola nucleus 21.18 17.35
CDY35067 Canola nucleus 20.87 17.22
CDY17084 Canola mitochondrion 0.31 0.49
Protein Annotations
MapMan:15.5.21Gene3D:3.20.90.10EnsemblPlants:CDY02510ProteinID:CDY02510ProteinID:CDY02510.1InterPro:F-box_dom
GO:GO:0003674GO:GO:0005488GO:GO:0005515EnsemblPlantsGene:GSBRNA2T00114166001InterPro:IPR001810InterPro:IPR025659
PFAM:PF00646PFAM:PF01167PRINTS:PR01573ScanProsite:PS01200ScanProsite:PS01201PANTHER:PTHR16517
PANTHER:PTHR16517:SF50SUPFAM:SSF54518InterPro:Tubby-like_CInterPro:Tubby_CInterPro:Tubby_C_CSUniParc:UPI0004EED2C9
SEG:seg:::::
Description
BnaA08g01170D
Coordinates
chrLK031935:+:612448..615235
Molecular Weight (calculated)
35813.6 Da
IEP (calculated)
9.752
GRAVY (calculated)
-0.464
Length
321 amino acids
Sequence
(BLAST)
001: MLPELLGEII RRVEDSEDQW PHRRDVVSCA CVSKKWREIA QEIVRSPLNS GKITFPSCLK LPGPREFSNQ CLIKRNKKTS TFYLYLALTP SFTDKGKFLL
101: AARRFRTGAY TEYIISLDAD DFSQGSNAYV GKLRSDFLGT NFTVYDSQPP HNGAKPSNGK ASRRFASKQI SPQVPAGNFE VGHVSYKFNL LKSRGPRRMI
201: STLRCPSSSP PPPSSSSTDH QNPYGSGLTI LKNKAPRWHE HLQCWCLNFH GRVTVASVKN FQLAATVDQS QPGGKGDEET VLLQFGKVGD DTFTMDYRQP
301: LSAFQAFAIC LTSFGTKLAC E
Best Arabidopsis Sequence Match ( AT1G53320.1 )
(BLAST)
001: MPLSRSLLSR RISNSFRFHQ GETTTAPESE SIPPPSNMAG SSSWSAMLPE LLGEIIRRVE ETEDRWPQRR DVVTCACVSK KWREITHDFA RSSLNSGKIT
101: FPSCLKLPGP RDFSNQCLIK RNKKTSTFYL YLALTPSFTD KGKFLLAARR FRTGAYTEYI ISLDADDFSQ GSNAYVGKLR SDFLGTNFTV YDSQPPHNGA
201: KPSNGKASRR FASKQISPQV PAGNFEVGHV SYKFNLLKSR GPRRMVSTLR CPSPSPSSSS AGLSSDQKPC DVTKIMKKPN KDGSSLTILK NKAPRWHEHL
301: QCWCLNFHGR VTVASVKNFQ LVATVDQSQP SGKGDEETVL LQFGKVGDDT FTMDYRQPLS AFQAFAICLT SFGTKLACE
Arabidopsis Description
TULP7Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:A0A178WNG9]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.