Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY25719 | Canola | cytosol | 96.88 | 94.24 |
AT1G53320.1 | Thale cress | mitochondrion | 91.28 | 77.31 |
CDY25863 | Canola | cytosol, mitochondrion | 90.65 | 77.19 |
CDY45927 | Canola | cytosol, plastid | 89.72 | 76.8 |
GSMUA_Achr7P25250_001 | Banana | cytosol | 73.21 | 73.9 |
CDY13913 | Canola | endoplasmic reticulum, extracellular | 6.85 | 73.33 |
GSMUA_Achr3P31460_001 | Banana | cytosol | 71.65 | 71.88 |
GSMUA_Achr4P01150_001 | Banana | cytosol | 71.34 | 71.79 |
KRH27356 | Soybean | mitochondrion | 81.62 | 69.31 |
KRH21960 | Soybean | mitochondrion | 81.62 | 68.77 |
CDY10578 | Canola | mitochondrion | 8.72 | 66.67 |
VIT_19s0014g01250.t01 | Wine grape | mitochondrion | 81.0 | 64.84 |
TraesCS3B01G304600.1 | Wheat | cytosol | 70.41 | 64.39 |
TraesCS3D01G270500.1 | Wheat | cytosol | 70.41 | 63.66 |
GSMUA_Achr7P13870_001 | Banana | mitochondrion, plastid | 58.26 | 63.39 |
TraesCS3A01G270800.1 | Wheat | cytosol | 70.09 | 63.38 |
HORVU3Hr1G061930.1 | Barley | cytosol | 69.78 | 62.92 |
Os01t0674500-01 | Rice | cytosol | 69.16 | 62.36 |
Zm00001d011578_P003 | Maize | nucleus | 69.16 | 62.01 |
PGSC0003DMT400018209 | Potato | mitochondrion | 73.83 | 61.4 |
EES03425 | Sorghum | plastid | 68.85 | 61.39 |
Os05t0560400-00 | Rice | cytosol | 66.98 | 61.08 |
Solyc07g062390.2.1 | Tomato | mitochondrion | 73.21 | 60.88 |
GSMUA_Achr4P10540_001 | Banana | mitochondrion | 71.03 | 59.38 |
GSMUA_Achr10P... | Banana | mitochondrion | 67.91 | 58.92 |
Os05t0514300-01 | Rice | mitochondrion | 67.29 | 58.06 |
Zm00001d038691_P001 | Maize | mitochondrion | 66.04 | 57.77 |
EES18499 | Sorghum | mitochondrion | 66.67 | 57.53 |
Zm00001d043895_P003 | Maize | cytosol | 65.73 | 55.82 |
TraesCS1A01G333900.1 | Wheat | mitochondrion | 64.8 | 55.76 |
TraesCS1B01G347200.1 | Wheat | mitochondrion | 64.49 | 55.5 |
TraesCS1D01G336400.1 | Wheat | mitochondrion | 64.8 | 55.32 |
HORVU1Hr1G076900.1 | Barley | cytosol | 63.55 | 52.99 |
OQU78419 | Sorghum | cytosol | 61.99 | 52.79 |
Os01t0759100-01 | Rice | cytosol, plastid | 55.14 | 48.1 |
CDY24698 | Canola | mitochondrion | 51.09 | 46.46 |
CDY25159 | Canola | cytosol | 54.21 | 46.4 |
CDY46301 | Canola | cytosol | 53.58 | 45.5 |
CDY05258 | Canola | mitochondrion | 50.78 | 45.28 |
CDY27467 | Canola | cytosol | 54.52 | 44.08 |
CDY55525 | Canola | cytosol | 55.14 | 44.03 |
CDX92589 | Canola | mitochondrion | 51.09 | 43.85 |
CDY36119 | Canola | cytosol | 55.14 | 41.94 |
CDY13570 | Canola | cytosol | 55.45 | 41.88 |
CDX84977 | Canola | cytosol | 54.52 | 41.67 |
CDY51990 | Canola | cytosol | 54.83 | 41.61 |
CDY45959 | Canola | cytosol | 55.45 | 41.49 |
CDY42119 | Canola | cytosol | 56.39 | 41.42 |
CDY65687 | Canola | cytosol, mitochondrion | 47.98 | 41.18 |
CDY66464 | Canola | cytosol | 54.52 | 40.79 |
CDY17028 | Canola | mitochondrion, nucleus | 49.22 | 40.0 |
CDY65845 | Canola | cytosol, mitochondrion | 55.45 | 39.56 |
CDY72036 | Canola | cytosol | 54.52 | 39.5 |
CDX87562 | Canola | cytosol, mitochondrion | 55.45 | 39.47 |
CDY17085 | Canola | cytosol, mitochondrion | 48.29 | 39.34 |
CDY13914 | Canola | mitochondrion | 29.59 | 38.93 |
HORVU0Hr1G001350.2 | Barley | cytosol | 37.69 | 32.44 |
CDY06747 | Canola | cytosol, mitochondrion | 47.66 | 26.47 |
CDY69989 | Canola | nucleus | 21.18 | 17.35 |
CDY35067 | Canola | nucleus | 20.87 | 17.22 |
CDY17084 | Canola | mitochondrion | 0.31 | 0.49 |
Protein Annotations
MapMan:15.5.21 | Gene3D:3.20.90.10 | EnsemblPlants:CDY02510 | ProteinID:CDY02510 | ProteinID:CDY02510.1 | InterPro:F-box_dom |
GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00114166001 | InterPro:IPR001810 | InterPro:IPR025659 |
PFAM:PF00646 | PFAM:PF01167 | PRINTS:PR01573 | ScanProsite:PS01200 | ScanProsite:PS01201 | PANTHER:PTHR16517 |
PANTHER:PTHR16517:SF50 | SUPFAM:SSF54518 | InterPro:Tubby-like_C | InterPro:Tubby_C | InterPro:Tubby_C_CS | UniParc:UPI0004EED2C9 |
SEG:seg | : | : | : | : | : |
Description
BnaA08g01170D
Coordinates
chrLK031935:+:612448..615235
Molecular Weight (calculated)
35813.6 Da
IEP (calculated)
9.752
GRAVY (calculated)
-0.464
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPELLGEII RRVEDSEDQW PHRRDVVSCA CVSKKWREIA QEIVRSPLNS GKITFPSCLK LPGPREFSNQ CLIKRNKKTS TFYLYLALTP SFTDKGKFLL
101: AARRFRTGAY TEYIISLDAD DFSQGSNAYV GKLRSDFLGT NFTVYDSQPP HNGAKPSNGK ASRRFASKQI SPQVPAGNFE VGHVSYKFNL LKSRGPRRMI
201: STLRCPSSSP PPPSSSSTDH QNPYGSGLTI LKNKAPRWHE HLQCWCLNFH GRVTVASVKN FQLAATVDQS QPGGKGDEET VLLQFGKVGD DTFTMDYRQP
301: LSAFQAFAIC LTSFGTKLAC E
101: AARRFRTGAY TEYIISLDAD DFSQGSNAYV GKLRSDFLGT NFTVYDSQPP HNGAKPSNGK ASRRFASKQI SPQVPAGNFE VGHVSYKFNL LKSRGPRRMI
201: STLRCPSSSP PPPSSSSTDH QNPYGSGLTI LKNKAPRWHE HLQCWCLNFH GRVTVASVKN FQLAATVDQS QPGGKGDEET VLLQFGKVGD DTFTMDYRQP
301: LSAFQAFAIC LTSFGTKLAC E
001: MPLSRSLLSR RISNSFRFHQ GETTTAPESE SIPPPSNMAG SSSWSAMLPE LLGEIIRRVE ETEDRWPQRR DVVTCACVSK KWREITHDFA RSSLNSGKIT
101: FPSCLKLPGP RDFSNQCLIK RNKKTSTFYL YLALTPSFTD KGKFLLAARR FRTGAYTEYI ISLDADDFSQ GSNAYVGKLR SDFLGTNFTV YDSQPPHNGA
201: KPSNGKASRR FASKQISPQV PAGNFEVGHV SYKFNLLKSR GPRRMVSTLR CPSPSPSSSS AGLSSDQKPC DVTKIMKKPN KDGSSLTILK NKAPRWHEHL
301: QCWCLNFHGR VTVASVKNFQ LVATVDQSQP SGKGDEETVL LQFGKVGDDT FTMDYRQPLS AFQAFAICLT SFGTKLACE
101: FPSCLKLPGP RDFSNQCLIK RNKKTSTFYL YLALTPSFTD KGKFLLAARR FRTGAYTEYI ISLDADDFSQ GSNAYVGKLR SDFLGTNFTV YDSQPPHNGA
201: KPSNGKASRR FASKQISPQV PAGNFEVGHV SYKFNLLKSR GPRRMVSTLR CPSPSPSSSS AGLSSDQKPC DVTKIMKKPN KDGSSLTILK NKAPRWHEHL
301: QCWCLNFHGR VTVASVKNFQ LVATVDQSQP SGKGDEETVL LQFGKVGDDT FTMDYRQPLS AFQAFAICLT SFGTKLACE
Arabidopsis Description
TULP7Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:A0A178WNG9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.