Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G304600.1 | Wheat | cytosol | 91.01 | 92.31 |
| TraesCS3D01G270500.1 | Wheat | cytosol | 91.57 | 91.83 |
| TraesCS3A01G270800.1 | Wheat | cytosol | 91.01 | 91.27 |
| HORVU3Hr1G061930.1 | Barley | cytosol | 90.17 | 90.17 |
| EES03425 | Sorghum | plastid | 88.76 | 87.78 |
| Zm00001d011578_P003 | Maize | nucleus | 87.92 | 87.43 |
| Zm00001d043895_P003 | Maize | cytosol | 84.27 | 79.37 |
| Os05t0560400-00 | Rice | cytosol | 77.81 | 78.69 |
| GSMUA_Achr3P31460_001 | Banana | cytosol | 67.13 | 74.69 |
| GSMUA_Achr7P25250_001 | Banana | cytosol | 66.57 | 74.53 |
| GSMUA_Achr4P01150_001 | Banana | cytosol | 65.73 | 73.35 |
| CDY02510 | Canola | cytosol | 62.36 | 69.16 |
| CDY25719 | Canola | cytosol | 62.64 | 67.58 |
| Os05t0514300-01 | Rice | mitochondrion | 69.38 | 66.4 |
| GSMUA_Achr4P10540_001 | Banana | mitochondrion | 69.1 | 64.06 |
| GSMUA_Achr10P... | Banana | mitochondrion | 66.57 | 64.05 |
| KRH27356 | Soybean | mitochondrion | 66.01 | 62.17 |
| GSMUA_Achr7P13870_001 | Banana | mitochondrion, plastid | 50.56 | 61.02 |
| KRH21960 | Soybean | mitochondrion | 65.17 | 60.89 |
| CDY25863 | Canola | cytosol, mitochondrion | 62.64 | 59.15 |
| Bra041095.1-P | Field mustard | cytosol, mitochondrion | 62.64 | 59.15 |
| CDY45927 | Canola | cytosol, plastid | 62.08 | 58.93 |
| AT1G53320.1 | Thale cress | mitochondrion | 62.64 | 58.84 |
| Bra030942.1-P | Field mustard | mitochondrion | 63.76 | 57.91 |
| VIT_19s0014g01250.t01 | Wine grape | mitochondrion | 64.89 | 57.61 |
| PGSC0003DMT400018209 | Potato | mitochondrion | 61.52 | 56.74 |
| Solyc07g062390.2.1 | Tomato | mitochondrion | 61.52 | 56.74 |
| Os01t0759100-01 | Rice | cytosol, plastid | 58.43 | 56.52 |
| Os03t0351400-01 | Rice | cytosol | 40.73 | 48.99 |
| Os07t0667000-01 | Rice | cytosol | 53.37 | 46.8 |
| Os05t0437900-01 | Rice | mitochondrion | 52.53 | 42.02 |
| Os02t0705300-01 | Rice | cytosol | 49.72 | 41.36 |
| Os12t0163400-01 | Rice | cytosol | 51.12 | 40.9 |
| Os04t0687900-01 | Rice | cytosol | 52.53 | 40.48 |
| Os01t0866800-01 | Rice | mitochondrion | 49.72 | 39.51 |
| Os08t0103300-01 | Rice | mitochondrion | 49.16 | 38.8 |
| Os11t0163600-01 | Rice | cytosol, mitochondrion | 12.64 | 26.79 |
| Os03t0348500-00 | Rice | extracellular | 8.43 | 17.75 |
| Os02t0179400-00 | Rice | nucleus | 12.08 | 10.41 |
Protein Annotations
| MapMan:15.5.21 | Gene3D:3.20.90.10 | EntrezGene:4325911 | EMBL:AK070401 | UniProt:B7EHT3 | ProteinID:BAD73373.1 |
| ProteinID:BAD73520.1 | ProteinID:BAS73645.1 | EMBL:EU847002 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0008289 |
| GO:GO:0035091 | InterPro:IPR025659 | EnsemblPlantsGene:Os01g0674500 | EnsemblPlants:Os01t0674500-01 | PFAM:PF01167 | PRINTS:PR01573 |
| ScanProsite:PS01200 | ScanProsite:PS01201 | PANTHER:PTHR16517 | PANTHER:PTHR16517:SF35 | UniProt:Q5QM27 | SUPFAM:SSF54518 |
| InterPro:Tubby-like_C | InterPro:Tubby_C | InterPro:Tubby_C_CS | UniParc:UPI000048DF3F | RefSeq:XP_015621789.1 | SEG:seg |
Description
tubby-like protein 9, tubby-like protein 1, F-box protein 34Similar to cDNA clone:J023048A08, full insert sequence. (Os01t0674500-01);Similar to cDNA clone:J023048A08, full insert sequence. (Os01t0674500-02);Similar to cDNA clone:J023048A08, full insert sequence. (Os01t0674500-03)
Coordinates
chr1:-:27716240..27721217
Molecular Weight (calculated)
40180.6 Da
IEP (calculated)
9.345
GRAVY (calculated)
-0.635
Length
356 amino acids
Sequence
(BLAST)
(BLAST)
001: MPRETPPPPP PEGGEVHEVV EGEDGQAEDQ EERWARLLPE LMSEVVRRVE ASGGERWPAR KDVVSCACVC RRWRDAAVAV VRPPAESGKI TFPSSLKQPG
101: PREFPMQCFI KRNKKNSTFY LYLGLTNATV DKGKFLMAAR RFRRGPHTEY IVSLDADDLS QGSNAYMGKL RSDFWGTNFK IYDSKPPYDG AKASSSRSSR
201: RFGSRRISPQ VSAGNYEVGQ VSYKYNLLKS RGPRRMYCAL ECPSTQETWE NCLKTKFRKP TGNTVLRNKA PRWHEHLQCW CLNFHGRVTV ASVKNFQLVA
301: AADPNDPASS KDEETVLLQF GKVDDNIFTM DYRQPLSAFQ AFAISLSSFG TKLACE
101: PREFPMQCFI KRNKKNSTFY LYLGLTNATV DKGKFLMAAR RFRRGPHTEY IVSLDADDLS QGSNAYMGKL RSDFWGTNFK IYDSKPPYDG AKASSSRSSR
201: RFGSRRISPQ VSAGNYEVGQ VSYKYNLLKS RGPRRMYCAL ECPSTQETWE NCLKTKFRKP TGNTVLRNKA PRWHEHLQCW CLNFHGRVTV ASVKNFQLVA
301: AADPNDPASS KDEETVLLQF GKVDDNIFTM DYRQPLSAFQ AFAISLSSFG TKLACE
001: MPLSRSLLSR RISNSFRFHQ GETTTAPESE SIPPPSNMAG SSSWSAMLPE LLGEIIRRVE ETEDRWPQRR DVVTCACVSK KWREITHDFA RSSLNSGKIT
101: FPSCLKLPGP RDFSNQCLIK RNKKTSTFYL YLALTPSFTD KGKFLLAARR FRTGAYTEYI ISLDADDFSQ GSNAYVGKLR SDFLGTNFTV YDSQPPHNGA
201: KPSNGKASRR FASKQISPQV PAGNFEVGHV SYKFNLLKSR GPRRMVSTLR CPSPSPSSSS AGLSSDQKPC DVTKIMKKPN KDGSSLTILK NKAPRWHEHL
301: QCWCLNFHGR VTVASVKNFQ LVATVDQSQP SGKGDEETVL LQFGKVGDDT FTMDYRQPLS AFQAFAICLT SFGTKLACE
101: FPSCLKLPGP RDFSNQCLIK RNKKTSTFYL YLALTPSFTD KGKFLLAARR FRTGAYTEYI ISLDADDFSQ GSNAYVGKLR SDFLGTNFTV YDSQPPHNGA
201: KPSNGKASRR FASKQISPQV PAGNFEVGHV SYKFNLLKSR GPRRMVSTLR CPSPSPSSSS AGLSSDQKPC DVTKIMKKPN KDGSSLTILK NKAPRWHEHL
301: QCWCLNFHGR VTVASVKNFQ LVATVDQSQP SGKGDEETVL LQFGKVGDDT FTMDYRQPLS AFQAFAICLT SFGTKLACE
Arabidopsis Description
TULP7Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:A0A178WNG9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.