CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	plastid
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011578_P003	Maize	nucleus	95.56	96.09
Os01t0674500-01	Rice	cytosol	87.78	88.76
TraesCS3B01G304600.1	Wheat	cytosol	84.72	86.89
TraesCS3D01G270500.1	Wheat	cytosol	85.28	86.48
Zm00001d043895_P003	Maize	cytosol	90.56	86.24
TraesCS3A01G270800.1	Wheat	cytosol	84.17	85.35
HORVU3Hr1G061930.1	Barley	cytosol	84.17	85.11
GSMUA_Achr7P25250_001	Banana	cytosol	66.39	75.16
GSMUA_Achr4P01150_001	Banana	cytosol	66.11	74.61
GSMUA_Achr3P31460_001	Banana	cytosol	66.11	74.38
CDY02510	Canola	cytosol	61.39	68.85
CDY25719	Canola	cytosol	61.67	67.27
GSMUA_Achr10P...	Banana	mitochondrion	65.83	64.05
OQU78419	Sorghum	cytosol	66.39	63.4
GSMUA_Achr4P10540_001	Banana	mitochondrion	67.22	63.02
EES18499	Sorghum	mitochondrion	64.72	62.63
KRH27356	Soybean	mitochondrion	64.44	61.38
GSMUA_Achr7P13870_001	Banana	mitochondrion, plastid	50.28	61.36
KRH21960	Soybean	mitochondrion	63.61	60.1
Bra041095.1-P	Field mustard	cytosol, mitochondrion	61.67	58.89
CDY25863	Canola	cytosol, mitochondrion	61.67	58.89
CDY45927	Canola	cytosol, plastid	61.11	58.67
VIT_19s0014g01250.t01	Wine grape	mitochondrion	65.0	58.35
AT1G53320.1	Thale cress	mitochondrion	61.39	58.31
Bra030942.1-P	Field mustard	mitochondrion	62.78	57.65
Solyc07g062390.2.1	Tomato	mitochondrion	60.56	56.48
PGSC0003DMT400018209	Potato	mitochondrion	60.56	56.48
KXG39376	Sorghum	cytosol, plastid	51.94	46.87
KXG23034	Sorghum	cytosol, mitochondrion	53.33	43.94
EER97690	Sorghum	cytosol	48.61	43.86
EES19596	Sorghum	mitochondrion	53.06	42.44
EES07397	Sorghum	cytosol	50.28	41.8
EES08030	Sorghum	cytosol, mitochondrion	51.94	41.01
KXG24166	Sorghum	cytosol	50.56	40.62
OQU82627	Sorghum	cytosol	51.11	40.62
EES01812	Sorghum	mitochondrion	51.67	38.75
KXG29622	Sorghum	plastid	21.67	18.4

Protein Annotations

MapMan:15.5.21	Gene3D:3.20.90.10	EntrezGene:8061846	UniProt:C5XG39	EnsemblPlants:EES03425	ProteinID:EES03425
ProteinID:EES03425.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0008289	GO:GO:0035091	InterPro:IPR025659
PFAM:PF01167	PRINTS:PR01573	ScanProsite:PS01200	ScanProsite:PS01201	PANTHER:PTHR16517	PANTHER:PTHR16517:SF35
EnsemblPlantsGene:SORBI_3003G253800	SUPFAM:SSF54518	unigene:Sbi.18295	InterPro:Tubby-like_C	InterPro:Tubby_C	InterPro:Tubby_C_CS
UniParc:UPI0001A84B06	RefSeq:XP_002458305.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:59246050..59250618

Molecular Weight (calculated)

40557.9 Da

IEP (calculated)

9.049

GRAVY (calculated)

-0.603

Length

360 amino acids

Sequence
(BLAST)

001: MSRHAAPAAP PPLPERGEMD EVVEADPDAE AEDQEERWAR LLPELLSDVV QRVEASGGER WPARKDVVSC ACVCRRWREA AVAVVRPPAE SGKITFPSSL
101: KQPGPRESPM QCFIKRNKKN STFYLYLGFT SSPVDKGKFL MAARRFRRGP HTEYIISLDS EDLSQGSNAY MGKLRSDFWG TNFKIYDSKP PYDGAKASSS
201: RSSRRFGSRR ISPQVSAGNY EVGQVSYKYN LLKSRGPRRM YCTLECPSAQ ETWENSLKTK FRRPLGPTTL RNKAPRWHEH LQCWCLNFHG RVTVASVKNF
301: QLVAAADPSD PTSSVDDETV LLQFGKVDED MFTMDYRQPL SAFQAFAISL SSFGTKLACE

Best Arabidopsis Sequence Match ( AT1G53320.1 )
(BLAST)

001: MPLSRSLLSR RISNSFRFHQ GETTTAPESE SIPPPSNMAG SSSWSAMLPE LLGEIIRRVE ETEDRWPQRR DVVTCACVSK KWREITHDFA RSSLNSGKIT
101: FPSCLKLPGP RDFSNQCLIK RNKKTSTFYL YLALTPSFTD KGKFLLAARR FRTGAYTEYI ISLDADDFSQ GSNAYVGKLR SDFLGTNFTV YDSQPPHNGA
201: KPSNGKASRR FASKQISPQV PAGNFEVGHV SYKFNLLKSR GPRRMVSTLR CPSPSPSSSS AGLSSDQKPC DVTKIMKKPN KDGSSLTILK NKAPRWHEHL
301: QCWCLNFHGR VTVASVKNFQ LVATVDQSQP SGKGDEETVL LQFGKVGDDT FTMDYRQPLS AFQAFAICLT SFGTKLACE

Arabidopsis Description

TULP7Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:A0A178WNG9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.