Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- nucleus 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| EES15000 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G16070.1 | EES15000 | AT2G04620.1 | 16792696 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d015485_P001 | Maize | plastid | 87.74 | 92.54 |
| TraesCS6B01G177300.1 | Wheat | plastid | 74.53 | 80.61 |
| HORVU6Hr1G029710.3 | Barley | plastid | 74.53 | 80.0 |
| TraesCS6D01G138700.1 | Wheat | plastid | 68.87 | 74.87 |
| TraesCS6A01G149400.1 | Wheat | plastid | 69.81 | 74.0 |
| VIT_09s0018g01630.t01 | Wine grape | cytosol | 50.47 | 56.76 |
| GSMUA_Achr1P10180_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 47.64 | 55.04 |
| KRH23693 | Soybean | plastid | 43.4 | 51.69 |
| Os02t0179400-00 | Rice | nucleus | 50.0 | 51.33 |
| Solyc03g117730.2.1 | Tomato | cytosol | 46.23 | 48.28 |
| PGSC0003DMT400036862 | Potato | nucleus | 46.93 | 47.84 |
| CDY35067 | Canola | nucleus | 43.16 | 47.04 |
| Bra026081.1-P | Field mustard | nucleus | 42.92 | 46.79 |
| AT1G16070.1 | Thale cress | nucleus | 43.63 | 46.6 |
| CDY69989 | Canola | nucleus | 42.22 | 45.66 |
| EES03425 | Sorghum | plastid | 18.4 | 21.67 |
| EES07397 | Sorghum | cytosol | 20.99 | 20.55 |
| KXG39376 | Sorghum | cytosol, plastid | 18.87 | 20.05 |
| KXG23034 | Sorghum | cytosol, mitochondrion | 20.52 | 19.91 |
| EES18499 | Sorghum | mitochondrion | 16.98 | 19.35 |
| OQU82627 | Sorghum | cytosol | 20.52 | 19.21 |
| KXG24166 | Sorghum | cytosol | 20.28 | 19.2 |
| EER97690 | Sorghum | cytosol | 17.92 | 19.05 |
| EES19596 | Sorghum | mitochondrion | 19.58 | 18.44 |
| OQU78419 | Sorghum | cytosol | 15.8 | 17.77 |
| EES08030 | Sorghum | cytosol, mitochondrion | 18.63 | 17.32 |
| EES01812 | Sorghum | mitochondrion | 18.16 | 16.04 |
Protein Annotations
| EnsemblPlants:KXG29622 | EnsemblPlantsGene:SORBI_3004G064700 | Gene3D:3.20.90.10 | InterPro:IPR025659 | InterPro:Tubby-like_C | InterPro:Tubby_C |
| PANTHER:PTHR16517 | PANTHER:PTHR16517:SF27 | PFAM:PF01167 | PRINTS:PR01573 | ProteinID:KXG29622 | ProteinID:KXG29622.1 |
| SEG:seg | SUPFAM:SSF54518 | UniParc:UPI0007F1FF1D | UniProt:A0A194YN41 | MapMan:15.5.21 | : |
Description
hypothetical protein
Coordinates
chr4:-:5216678..5219045
Molecular Weight (calculated)
46064.9 Da
IEP (calculated)
10.551
GRAVY (calculated)
-0.529
Length
424 amino acids
Sequence
(BLAST)
(BLAST)
001: MATATTTPNP KATTTRARRE PLRPRSNNSA ASPSPAVASA RRGPAASAEK ENQRPKSLGH GKKEEGKTAA AAAATTATEL LKPAEPAPAV APPPPAPPLK
101: PSSLQLRMKD EAAEAAAAAQ APPAFVVGPR GRELLLPPPS SNYEAWDLSD SESAPASSWA TLPNRALLCR PLPQDVGRCT CVIVREAATG ARGVALYSLY
201: TNEGQGRQDR KLAVARHRRR RGRSEFIVAQ NQDGIFCTAD NNFLGTVGAN LVGSKYQIWG QGGSRADELN NQAKRLLGVV AFAPTITTLT GSFRSMRAWI
301: PKNQSMQLKT NNSAQIQHVS GLPKDWQEKK SRADQLCSRA PFYNHMTKRY ELDFRERAGR MGYKVQTSVK NFQMTLEENG RQTVLQLGRV GKSKYIMDFR
401: YPLTGYQAFC ICLASIDAKL CCTL
101: PSSLQLRMKD EAAEAAAAAQ APPAFVVGPR GRELLLPPPS SNYEAWDLSD SESAPASSWA TLPNRALLCR PLPQDVGRCT CVIVREAATG ARGVALYSLY
201: TNEGQGRQDR KLAVARHRRR RGRSEFIVAQ NQDGIFCTAD NNFLGTVGAN LVGSKYQIWG QGGSRADELN NQAKRLLGVV AFAPTITTLT GSFRSMRAWI
301: PKNQSMQLKT NNSAQIQHVS GLPKDWQEKK SRADQLCSRA PFYNHMTKRY ELDFRERAGR MGYKVQTSVK NFQMTLEENG RQTVLQLGRV GKSKYIMDFR
401: YPLTGYQAFC ICLASIDAKL CCTL
001: MAGSRKVNDL LEENKGNVDT ITGSLSTQKG EDKENVSPEK VSTSVETRKL DRALKSQSMK GNSGFPTEVT NFKSFSTGGR TALKQSSLQA CMQKNSEVDK
101: SSFGMKTWTS VDSEHSSSLK VWEFSDSEAA PASSWSTLPN RALLCKTLPL DVGRCTCLIV KEQSPEGLSH GSVYSLYTHE GRGRKDRKLA VAYHSRRNGK
201: SIFRVAQNVK GLLCSSDESY VGSMTANLLG SKYYIWDKGV RVGSVGKMVK PLLSVVIFTP TITTWTGSYR RMRTLLPKQQ PMQKNNNKQV QQASKLPLDW
301: LENKEKIQKL CSRIPHYNKI SKQHELDFRD RGRTGLRIQS SVKNFQLTLT ETPRQTILQM GRVDKARYVI DFRYPFSGYQ AFCICLASID SKLCCTV
101: SSFGMKTWTS VDSEHSSSLK VWEFSDSEAA PASSWSTLPN RALLCKTLPL DVGRCTCLIV KEQSPEGLSH GSVYSLYTHE GRGRKDRKLA VAYHSRRNGK
201: SIFRVAQNVK GLLCSSDESY VGSMTANLLG SKYYIWDKGV RVGSVGKMVK PLLSVVIFTP TITTWTGSYR RMRTLLPKQQ PMQKNNNKQV QQASKLPLDW
301: LENKEKIQKL CSRIPHYNKI SKQHELDFRD RGRTGLRIQS SVKNFQLTLT ETPRQTILQM GRVDKARYVI DFRYPFSGYQ AFCICLASID SKLCCTV
Arabidopsis Description
TULP8TLP8 [Source:UniProtKB/TrEMBL;Acc:A0A178WHW0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.