CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038691_P001	Maize	mitochondrion	95.43	96.73
Os05t0514300-01	Rice	mitochondrion	85.22	85.22
TraesCS1B01G347200.1	Wheat	mitochondrion	82.8	82.57
TraesCS1A01G333900.1	Wheat	mitochondrion	82.8	82.57
TraesCS1D01G336400.1	Wheat	mitochondrion	81.99	81.12
HORVU1Hr1G076900.1	Barley	cytosol	76.08	73.51
GSMUA_Achr7P25250_001	Banana	cytosol	61.83	72.33
GSMUA_Achr3P31460_001	Banana	cytosol	61.56	71.56
GSMUA_Achr4P01150_001	Banana	cytosol	60.48	70.53
CDY02510	Canola	cytosol	57.53	66.67
CDY25719	Canola	cytosol	57.8	65.15
EES03425	Sorghum	plastid	62.63	64.72
GSMUA_Achr4P10540_001	Banana	mitochondrion	64.25	62.24
GSMUA_Achr7P13870_001	Banana	mitochondrion, plastid	48.92	61.69
KRH27356	Soybean	mitochondrion	62.37	61.38
GSMUA_Achr10P...	Banana	mitochondrion	60.75	61.08
KRH21960	Soybean	mitochondrion	62.37	60.89
Solyc07g062390.2.1	Tomato	mitochondrion	61.29	59.07
AT1G53320.1	Thale cress	mitochondrion	59.95	58.84
PGSC0003DMT400018209	Potato	mitochondrion	61.02	58.81
CDY25863	Canola	cytosol, mitochondrion	59.41	58.62
Bra041095.1-P	Field mustard	cytosol, mitochondrion	59.41	58.62
VIT_19s0014g01250.t01	Wine grape	mitochondrion	62.9	58.35
CDY45927	Canola	cytosol, plastid	58.6	58.13
Bra030942.1-P	Field mustard	mitochondrion	60.75	57.65
OQU78419	Sorghum	cytosol	54.84	54.11
KXG39376	Sorghum	cytosol, plastid	51.88	48.37
EER97690	Sorghum	cytosol	45.97	42.86
EES07397	Sorghum	cytosol	48.66	41.8
EES19596	Sorghum	mitochondrion	50.0	41.33
OQU82627	Sorghum	cytosol	49.46	40.62
KXG23034	Sorghum	cytosol, mitochondrion	47.58	40.5
KXG24166	Sorghum	cytosol	47.31	39.29
EES08030	Sorghum	cytosol, mitochondrion	47.58	38.82
EES01812	Sorghum	mitochondrion	47.04	36.46
KXG29622	Sorghum	plastid	19.35	16.98

Protein Annotations

Gene3D:1.20.1280.50	MapMan:15.5.21	Gene3D:3.20.90.10	EntrezGene:8082966	UniProt:C5Z0X1	EnsemblPlants:EES18499
ProteinID:EES18499	ProteinID:EES18499.1	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0008289	GO:GO:0035091	InterPro:IPR001810	InterPro:IPR025659	PFAM:PF00646
PFAM:PF01167	PRINTS:PR01573	ScanProsite:PS01200	ScanProsite:PS01201	PANTHER:PTHR16517	PANTHER:PTHR16517:SF32
EnsemblPlantsGene:SORBI_3009G195900	SUPFAM:SSF54518	SUPFAM:SSF81383	unigene:Sbi.10839	InterPro:Tubby-like_C	InterPro:Tubby_C
InterPro:Tubby_C_CS	UniParc:UPI0001A88B6E	RefSeq:XP_002440069.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr9:+:54672164..54677972

Molecular Weight (calculated)

41706.5 Da

IEP (calculated)

8.997

GRAVY (calculated)

-0.479

Length

372 amino acids

Sequence
(BLAST)

001: MISWRRSASW LSSASRSSLG AAVGGEAKVT PEVDPAAAQE MEEDEEADEE RWSRLLPELL TEIMRRVDAG AERWPPRRDV VVCACVCRRW RDAAVSVVRP
101: PLECGRITFP SSLKQPGPRD APMHCFIRRD KKNSTFSLYL SLTQALTDKG KFLLAARRFR QGAHTEYIIS YDYDDLHPRS SSYVGKLRSD FLGTKFIIYD
201: SQAPYDGAKP SRSRSTRRFA SKQISPQVSG GNFEVGQVTY KFNFMKSRGP RRMQCNIQCP VSQGTMSDPS KEKTPSSSSL DLKNKAPRWH DHLQCWCLNF
301: HGRVTVASVK NFQLVATAGS GGPWGVGDEE TVILQFGKIE DDAFTMDYRQ PLSAFQAFAI CLTSFGTKLA CE

Best Arabidopsis Sequence Match ( AT1G53320.1 )
(BLAST)

001: MPLSRSLLSR RISNSFRFHQ GETTTAPESE SIPPPSNMAG SSSWSAMLPE LLGEIIRRVE ETEDRWPQRR DVVTCACVSK KWREITHDFA RSSLNSGKIT
101: FPSCLKLPGP RDFSNQCLIK RNKKTSTFYL YLALTPSFTD KGKFLLAARR FRTGAYTEYI ISLDADDFSQ GSNAYVGKLR SDFLGTNFTV YDSQPPHNGA
201: KPSNGKASRR FASKQISPQV PAGNFEVGHV SYKFNLLKSR GPRRMVSTLR CPSPSPSSSS AGLSSDQKPC DVTKIMKKPN KDGSSLTILK NKAPRWHEHL
301: QCWCLNFHGR VTVASVKNFQ LVATVDQSQP SGKGDEETVL LQFGKVGDDT FTMDYRQPLS AFQAFAICLT SFGTKLACE

Arabidopsis Description

TULP7Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:A0A178WNG9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.