Factsheet for HORVU1Hr1G076900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G347200.1	Wheat	mitochondrion	83.64	86.33
TraesCS1D01G336400.1	Wheat	mitochondrion	84.16	86.17
TraesCS1A01G333900.1	Wheat	mitochondrion	83.38	86.06
Os05t0514300-01	Rice	mitochondrion	75.84	78.49
Zm00001d038691_P001	Maize	mitochondrion	73.25	76.84
EES18499	Sorghum	mitochondrion	73.51	76.08
GSMUA_Achr7P25250_001	Banana	cytosol	57.92	70.13
GSMUA_Achr4P01150_001	Banana	cytosol	57.4	69.28
GSMUA_Achr3P31460_001	Banana	cytosol	56.88	68.44
CDY02510	Canola	cytosol	52.99	63.55
CDY25719	Canola	cytosol	53.25	62.12
HORVU3Hr1G061930.1	Barley	cytosol	56.62	61.24
GSMUA_Achr7P13870_001	Banana	mitochondrion, plastid	45.19	58.98
GSMUA_Achr4P10540_001	Banana	mitochondrion	58.44	58.59
KRH21960	Soybean	mitochondrion	57.92	58.53
KRH27356	Soybean	mitochondrion	57.4	58.47
GSMUA_Achr10P...	Banana	mitochondrion	55.84	58.11
VIT_19s0014g01250.t01	Wine grape	mitochondrion	57.66	55.36
AT1G53320.1	Thale cress	mitochondrion	54.29	55.15
CDY45927	Canola	cytosol, plastid	53.25	54.67
Bra041095.1-P	Field mustard	cytosol, mitochondrion	53.51	54.64
CDY25863	Canola	cytosol, mitochondrion	53.51	54.64
Solyc07g062390.2.1	Tomato	mitochondrion	54.03	53.89
PGSC0003DMT400018209	Potato	mitochondrion	54.03	53.89
Bra030942.1-P	Field mustard	mitochondrion	54.55	53.57
HORVU0Hr1G001350.2	Barley	cytosol	48.31	49.87
HORVU5Hr1G023650.1	Barley	plastid	28.31	45.23
HORVU6Hr1G068970.3	Barley	cytosol	45.97	41.45
HORVU5Hr1G040000.2	Barley	cytosol	46.49	40.77
HORVU1Hr1G074940.3	Barley	cytosol, mitochondrion, nucleus, plastid	46.75	39.82
HORVU3Hr1G083290.1	Barley	mitochondrion	46.23	39.64
HORVU4Hr1G020110.3	Barley	cytosol, mitochondrion	44.94	39.32
HORVU2Hr1G124880.1	Barley	plastid	45.97	28.5
HORVU6Hr1G029710.3	Barley	plastid	18.7	18.23

Protein Annotations

EnsemblPlants:HORVU1Hr1G076900.1	EnsemblPlantsGene:HORVU1Hr1G076900	Gene3D:3.20.90.10	InterPro:IPR025659	InterPro:Tubby-like_C	InterPro:Tubby_C
InterPro:Tubby_C_CS	PANTHER:PTHR16517	PANTHER:PTHR16517:SF32	PFAM:PF01167	PRINTS:PR01573	ScanProsite:PS01200
ScanProsite:PS01201	SEG:seg	SUPFAM:SSF54518	UniParc:UPI000B4701A5	UniProt:A0A287GBK0	MapMan:15.5.21

Description

Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:A0A287GBK0]

Coordinates

chrchr1H:-:515953680..515958613

Molecular Weight (calculated)

43183.4 Da

IEP (calculated)

10.190

GRAVY (calculated)

-0.526

Length

385 amino acids

Sequence
(BLAST)

001: APVPPTPPHL SPRKLPRALG ERDHSPARPS IHHGPVAAQL VLAHVLLARA GRHRRRERGH EERWSRLLPE LLTDIVRRVD AGAERWPPRR DVVACACACR
101: RWRDAAVSVV RPPLECGRIT FPSSLKQPGP RDAPMHCFIR RNKSTSTFYL YLSLTQALTD KGKFLLSARR FRHGAHTEYI ISYDSDDLYP GSNSGVGKLR
201: SDFLGTKFIM YDNQKPYDGA KSLKSRSSRR FATKQISPND SGSNLEVGQV SYRFNFLKSR GPRRMHCSIQ CPVDQGSASD PSKETPQSTS SSLSLKNKAP
301: RWHDHLQCWC LNFHGRVTVA SVKNFQLVAP AGTSDPWGVG DEETVILQFG KIEDDAFTMD FRYPLSAYQA FAICLTSFGT KLACE

Best Arabidopsis Sequence Match ( AT1G53320.1 )
(BLAST)

001: MPLSRSLLSR RISNSFRFHQ GETTTAPESE SIPPPSNMAG SSSWSAMLPE LLGEIIRRVE ETEDRWPQRR DVVTCACVSK KWREITHDFA RSSLNSGKIT
101: FPSCLKLPGP RDFSNQCLIK RNKKTSTFYL YLALTPSFTD KGKFLLAARR FRTGAYTEYI ISLDADDFSQ GSNAYVGKLR SDFLGTNFTV YDSQPPHNGA
201: KPSNGKASRR FASKQISPQV PAGNFEVGHV SYKFNLLKSR GPRRMVSTLR CPSPSPSSSS AGLSSDQKPC DVTKIMKKPN KDGSSLTILK NKAPRWHEHL
301: QCWCLNFHGR VTVASVKNFQ LVATVDQSQP SGKGDEETVL LQFGKVGDDT FTMDYRQPLS AFQAFAICLT SFGTKLACE

Arabidopsis Description

TULP7Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:A0A178WNG9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.