Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os05t0560400-00 | Rice | cytosol | 66.58 | 71.31 |
| GSMUA_Achr3P31460_001 | Banana | cytosol | 56.76 | 66.88 |
| GSMUA_Achr7P25250_001 | Banana | cytosol | 56.23 | 66.67 |
| EES03425 | Sorghum | plastid | 63.4 | 66.39 |
| GSMUA_Achr4P01150_001 | Banana | cytosol | 54.11 | 63.95 |
| CDY02510 | Canola | cytosol | 52.79 | 61.99 |
| CDY25719 | Canola | cytosol | 53.05 | 60.61 |
| GSMUA_Achr4P10540_001 | Banana | mitochondrion | 57.29 | 56.25 |
| GSMUA_Achr10P... | Banana | mitochondrion | 54.91 | 55.95 |
| GSMUA_Achr7P13870_001 | Banana | mitochondrion, plastid | 43.5 | 55.59 |
| EES18499 | Sorghum | mitochondrion | 54.11 | 54.84 |
| KRH21960 | Soybean | mitochondrion | 54.91 | 54.33 |
| KRH27356 | Soybean | mitochondrion | 54.38 | 54.23 |
| AT1G53320.1 | Thale cress | mitochondrion | 54.11 | 53.83 |
| CDY25863 | Canola | cytosol, mitochondrion | 53.05 | 53.05 |
| Bra041095.1-P | Field mustard | cytosol, mitochondrion | 53.05 | 53.05 |
| CDY45927 | Canola | cytosol, plastid | 52.52 | 52.8 |
| Bra030942.1-P | Field mustard | mitochondrion | 54.64 | 52.55 |
| VIT_19s0014g01250.t01 | Wine grape | mitochondrion | 54.38 | 51.12 |
| PGSC0003DMT400018209 | Potato | mitochondrion | 51.99 | 50.78 |
| Solyc07g062390.2.1 | Tomato | mitochondrion | 51.72 | 50.52 |
| KXG39376 | Sorghum | cytosol, plastid | 44.83 | 42.36 |
| KXG23034 | Sorghum | cytosol, mitochondrion | 45.09 | 38.9 |
| EER97690 | Sorghum | cytosol | 40.85 | 38.6 |
| EES19596 | Sorghum | mitochondrion | 45.09 | 37.78 |
| OQU82627 | Sorghum | cytosol | 43.77 | 36.42 |
| EES07397 | Sorghum | cytosol | 41.38 | 36.03 |
| EES08030 | Sorghum | cytosol, mitochondrion | 43.5 | 35.96 |
| KXG24166 | Sorghum | cytosol | 42.71 | 35.94 |
| EES01812 | Sorghum | mitochondrion | 44.3 | 34.79 |
| KXG29622 | Sorghum | plastid | 17.77 | 15.8 |
Protein Annotations
| Gene3D:1.20.1280.50 | MapMan:15.5.21 | Gene3D:3.20.90.10 | EntrezGene:8063588 | UniProt:A0A1Z5R4E7 | InterPro:F-box-like_dom_sf |
| InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001810 | InterPro:IPR025659 |
| EnsemblPlants:OQU78419 | ProteinID:OQU78419 | ProteinID:OQU78419.1 | PFAM:PF01167 | PFAM:PF12937 | PRINTS:PR01573 |
| ScanProsite:PS01200 | PANTHER:PTHR16517 | PANTHER:PTHR16517:SF50 | EnsemblPlantsGene:SORBI_3009G230500 | SUPFAM:SSF54518 | SUPFAM:SSF81383 |
| InterPro:Tubby-like_C | InterPro:Tubby_C | InterPro:Tubby_C_CS | UniParc:UPI000B8BA4D5 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr9:+:57061616..57065103
Molecular Weight (calculated)
42640.4 Da
IEP (calculated)
9.679
GRAVY (calculated)
-0.358
Length
377 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAPLVPREE GLRQEGAVEQ EEEDRWACLL PELLAEVLRR LEASGGERWP ARKDVVSCAC VCRRWRDVAA TVVRPLPESG KITFLASLKQ PGPKDFPIQC
101: FIKRNKKNSL FYLYLGLTNN PMMPATDKGK FLMAAKRFRR GAPTEYIISL DADDISQGNK AYVGKLRSDF LGTNFKIYDS QPPYDGAKAS STRSIRRFGS
201: RRISPQVSSG NFDVGQVSYK YNLLKSRGPR RMLCTMECPS VQETWENSLK VMSFRQTGST ILRNNAPRWH EHLQCWCLNF HGRVTVASVK NFQLVATTDT
301: SHPDSVDDAE IVLQFGKDGC VHQLSHPLMS SGLPGAITMA FAVRGYLYLF FRNGFCGATY KLHKFALQSC FMDRRYM
101: FIKRNKKNSL FYLYLGLTNN PMMPATDKGK FLMAAKRFRR GAPTEYIISL DADDISQGNK AYVGKLRSDF LGTNFKIYDS QPPYDGAKAS STRSIRRFGS
201: RRISPQVSSG NFDVGQVSYK YNLLKSRGPR RMLCTMECPS VQETWENSLK VMSFRQTGST ILRNNAPRWH EHLQCWCLNF HGRVTVASVK NFQLVATTDT
301: SHPDSVDDAE IVLQFGKDGC VHQLSHPLMS SGLPGAITMA FAVRGYLYLF FRNGFCGATY KLHKFALQSC FMDRRYM
001: MPLSRSLLSR RISNSFRFHQ GETTTAPESE SIPPPSNMAG SSSWSAMLPE LLGEIIRRVE ETEDRWPQRR DVVTCACVSK KWREITHDFA RSSLNSGKIT
101: FPSCLKLPGP RDFSNQCLIK RNKKTSTFYL YLALTPSFTD KGKFLLAARR FRTGAYTEYI ISLDADDFSQ GSNAYVGKLR SDFLGTNFTV YDSQPPHNGA
201: KPSNGKASRR FASKQISPQV PAGNFEVGHV SYKFNLLKSR GPRRMVSTLR CPSPSPSSSS AGLSSDQKPC DVTKIMKKPN KDGSSLTILK NKAPRWHEHL
301: QCWCLNFHGR VTVASVKNFQ LVATVDQSQP SGKGDEETVL LQFGKVGDDT FTMDYRQPLS AFQAFAICLT SFGTKLACE
101: FPSCLKLPGP RDFSNQCLIK RNKKTSTFYL YLALTPSFTD KGKFLLAARR FRTGAYTEYI ISLDADDFSQ GSNAYVGKLR SDFLGTNFTV YDSQPPHNGA
201: KPSNGKASRR FASKQISPQV PAGNFEVGHV SYKFNLLKSR GPRRMVSTLR CPSPSPSSSS AGLSSDQKPC DVTKIMKKPN KDGSSLTILK NKAPRWHEHL
301: QCWCLNFHGR VTVASVKNFQ LVATVDQSQP SGKGDEETVL LQFGKVGDDT FTMDYRQPLS AFQAFAICLT SFGTKLACE
Arabidopsis Description
TULP7Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:A0A178WNG9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.