Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES03425 | Sorghum | plastid | 96.09 | 95.56 |
| Os01t0674500-01 | Rice | cytosol | 87.43 | 87.92 |
| TraesCS3B01G304600.1 | Wheat | cytosol | 84.92 | 86.61 |
| Zm00001d043895_P003 | Maize | cytosol | 91.34 | 86.51 |
| TraesCS3D01G270500.1 | Wheat | cytosol | 85.47 | 86.2 |
| TraesCS3A01G270800.1 | Wheat | cytosol | 84.36 | 85.07 |
| HORVU3Hr1G061930.1 | Barley | cytosol | 84.08 | 84.55 |
| GSMUA_Achr4P01150_001 | Banana | cytosol | 66.76 | 74.92 |
| GSMUA_Achr7P25250_001 | Banana | cytosol | 66.2 | 74.53 |
| GSMUA_Achr3P31460_001 | Banana | cytosol | 66.48 | 74.38 |
| CDY02510 | Canola | cytosol | 62.01 | 69.16 |
| CDY25719 | Canola | cytosol | 62.29 | 67.58 |
| GSMUA_Achr10P... | Banana | mitochondrion | 65.92 | 63.78 |
| GSMUA_Achr4P10540_001 | Banana | mitochondrion | 67.88 | 63.28 |
| Zm00001d038691_P001 | Maize | mitochondrion | 64.8 | 63.22 |
| GSMUA_Achr7P13870_001 | Banana | mitochondrion, plastid | 51.12 | 62.03 |
| KRH27356 | Soybean | mitochondrion | 64.8 | 61.38 |
| KRH21960 | Soybean | mitochondrion | 63.97 | 60.1 |
| CDY45927 | Canola | cytosol, plastid | 62.57 | 59.73 |
| CDY25863 | Canola | cytosol, mitochondrion | 62.85 | 59.68 |
| Bra041095.1-P | Field mustard | cytosol, mitochondrion | 62.85 | 59.68 |
| AT1G53320.1 | Thale cress | mitochondrion | 62.29 | 58.84 |
| Bra030942.1-P | Field mustard | mitochondrion | 63.69 | 58.16 |
| VIT_19s0014g01250.t01 | Wine grape | mitochondrion | 64.53 | 57.61 |
| PGSC0003DMT400018209 | Potato | mitochondrion | 60.34 | 55.96 |
| Solyc07g062390.2.1 | Tomato | mitochondrion | 60.34 | 55.96 |
| Zm00001d029165_P004 | Maize | cytosol, plastid | 50.84 | 45.39 |
| Zm00001d002896_P001 | Maize | cytosol | 51.4 | 41.82 |
| Zm00001d053179_P001 | Maize | cytosol | 52.23 | 41.74 |
| Zm00001d017773_P001 | Maize | cytosol | 50.84 | 41.65 |
| Zm00001d051568_P001 | Maize | cytosol | 50.28 | 41.28 |
| Zm00001d007106_P001 | Maize | cytosol | 34.92 | 40.06 |
| Zm00001d038310_P003 | Maize | mitochondrion | 53.91 | 38.76 |
| Zm00001d052765_P002 | Maize | mitochondrion | 48.88 | 38.38 |
| Zm00001d042724_P002 | Maize | mitochondrion | 50.56 | 37.71 |
| Zm00001d033948_P004 | Maize | cytosol | 13.41 | 26.52 |
| Zm00001d029092_P001 | Maize | mitochondrion | 20.39 | 21.1 |
| Zm00001d047019_P001 | Maize | mitochondrion | 20.39 | 21.1 |
| Zm00001d015485_P001 | Maize | plastid | 20.39 | 18.16 |
| Zm00001d039784_P001 | Maize | mitochondrion, nucleus, peroxisome, plastid | 11.73 | 15.33 |
Protein Annotations
| EMBL:BT036042 | EMBL:HQ858729 | EnsemblPlants:Zm00001d011578_P003 | EnsemblPlants:Zm00001d011578_T003 | EnsemblPlantsGene:Zm00001d011578 | EntrezGene:100193706 |
| Gene3D:3.20.90.10 | InterPro:IPR025659 | InterPro:Tubby-like_C | InterPro:Tubby_C | InterPro:Tubby_C_CS | PANTHER:PTHR16517 |
| PANTHER:PTHR16517:SF35 | PFAM:PF01167 | PRINTS:PR01573 | ProteinID:AQK97273.1 | ScanProsite:PS01200 | ScanProsite:PS01201 |
| SEG:seg | SUPFAM:SSF54518 | UniParc:UPI00017B6EE0 | UniProt:B4FG04 | MapMan:15.5.21 | : |
Description
TUB-transcription factor 1Tubby-like F-box protein 7
Coordinates
chr8:-:154851191..154856045
Molecular Weight (calculated)
40478.8 Da
IEP (calculated)
9.199
GRAVY (calculated)
-0.646
Length
358 amino acids
Sequence
(BLAST)
(BLAST)
001: MPRDGAQAAP PPERGEMDEV VEADPDTEAE DQEERWARLL PELLSDVVRR VEASGGERWP ARKDVVSCAC VCRRWREAAV SVVRPPAESG KITFPSSLKQ
101: PGPRERPMQC FIKRNKNNST FYLYLGFTSS PVDKGKFLMA ARRFRRGPHT EYIISLDAED LSQGSNAYMG KLRSDFWGTN FKIYDSKPPY DGAKASSSRS
201: SRRFGSRRIS PQVSAGNYEV GQVSYKYNLL KSRGPRRMYC TLECPSAQET WENSLKTKFR RPLGPTTLRN KAPRWHEHLQ CWCLNFHGRV TVASVKNFQL
301: VAAADPSEPT TNVDDETVLL QFGKVDSDMF TMDYRQPLSA FQAFAISLSS FGTKLACE
101: PGPRERPMQC FIKRNKNNST FYLYLGFTSS PVDKGKFLMA ARRFRRGPHT EYIISLDAED LSQGSNAYMG KLRSDFWGTN FKIYDSKPPY DGAKASSSRS
201: SRRFGSRRIS PQVSAGNYEV GQVSYKYNLL KSRGPRRMYC TLECPSAQET WENSLKTKFR RPLGPTTLRN KAPRWHEHLQ CWCLNFHGRV TVASVKNFQL
301: VAAADPSEPT TNVDDETVLL QFGKVDSDMF TMDYRQPLSA FQAFAISLSS FGTKLACE
001: MPLSRSLLSR RISNSFRFHQ GETTTAPESE SIPPPSNMAG SSSWSAMLPE LLGEIIRRVE ETEDRWPQRR DVVTCACVSK KWREITHDFA RSSLNSGKIT
101: FPSCLKLPGP RDFSNQCLIK RNKKTSTFYL YLALTPSFTD KGKFLLAARR FRTGAYTEYI ISLDADDFSQ GSNAYVGKLR SDFLGTNFTV YDSQPPHNGA
201: KPSNGKASRR FASKQISPQV PAGNFEVGHV SYKFNLLKSR GPRRMVSTLR CPSPSPSSSS AGLSSDQKPC DVTKIMKKPN KDGSSLTILK NKAPRWHEHL
301: QCWCLNFHGR VTVASVKNFQ LVATVDQSQP SGKGDEETVL LQFGKVGDDT FTMDYRQPLS AFQAFAICLT SFGTKLACE
101: FPSCLKLPGP RDFSNQCLIK RNKKTSTFYL YLALTPSFTD KGKFLLAARR FRTGAYTEYI ISLDADDFSQ GSNAYVGKLR SDFLGTNFTV YDSQPPHNGA
201: KPSNGKASRR FASKQISPQV PAGNFEVGHV SYKFNLLKSR GPRRMVSTLR CPSPSPSSSS AGLSSDQKPC DVTKIMKKPN KDGSSLTILK NKAPRWHEHL
301: QCWCLNFHGR VTVASVKNFQ LVATVDQSQP SGKGDEETVL LQFGKVGDDT FTMDYRQPLS AFQAFAICLT SFGTKLACE
Arabidopsis Description
TULP7Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:A0A178WNG9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.