Factsheet for Os01t0866800-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G083290.1	Barley	mitochondrion	85.27	85.08
TraesCS3D01G371600.1	Wheat	mitochondrion	85.27	85.08
TraesCS3A01G378300.1	Wheat	mitochondrion	85.27	85.08
TraesCS3B01G411000.1	Wheat	mitochondrion	85.04	84.67
EES01812	Sorghum	mitochondrion	89.06	83.12
Zm00001d042724_P002	Maize	mitochondrion	88.17	82.29
Os05t0437900-01	Rice	mitochondrion	80.8	81.35
GSMUA_Achr9P29600_001	Banana	cytosol, mitochondrion	50.22	73.05
Os12t0163400-01	Rice	cytosol	69.42	69.89
Os08t0103300-01	Rice	mitochondrion	66.52	66.08
Os04t0687900-01	Rice	cytosol	68.08	66.02
Os03t0351400-01	Rice	cytosol	39.29	59.46
Os02t0705300-01	Rice	cytosol	51.34	53.74
Os11t0163600-01	Rice	cytosol, mitochondrion	19.87	52.98
Os07t0667000-01	Rice	cytosol	47.1	51.97
Os05t0560400-00	Rice	cytosol	39.29	50.0
Os01t0674500-01	Rice	cytosol	39.51	49.72
Os05t0514300-01	Rice	mitochondrion	40.62	48.92
Os01t0759100-01	Rice	cytosol, plastid	35.71	43.48
Os03t0348500-00	Rice	extracellular	11.38	30.18
Os02t0179400-00	Rice	nucleus	10.49	11.38

Protein Annotations

Gene3D:1.20.1280.50	MapMan:15.5.21	Gene3D:3.20.90.10	EntrezGene:4325075	EMBL:AK102221	ProteinID:BAC01219.1
ProteinID:BAF06824.1	ProteinID:BAS75392.1	ProteinID:EAZ14277.1	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0008289	GO:GO:0035091	InterPro:IPR001810	InterPro:IPR025659
EnsemblPlantsGene:Os01g0866800	EnsemblPlants:Os01t0866800-01	PFAM:PF00646	PFAM:PF01167	PRINTS:PR01573	ScanProsite:PS01200
ScanProsite:PS01201	PANTHER:PTHR16517	PANTHER:PTHR16517:SF39	UniProt:Q8LJA9	SUPFAM:SSF54518	SUPFAM:SSF81383
InterPro:Tubby-like_C	InterPro:Tubby_C	InterPro:Tubby_C_CS	UniParc:UPI000009CC7E	RefSeq:XP_015641437.1	SEG:seg

Description

tubby-like protein 5, tubby-like protein 3, F-box protein 50Similar to F24P17.15 protein (Tubby-like protein TULP9). (Os01t0866800-01)

Coordinates

chr1:+:37535953..37539344

Molecular Weight (calculated)

49926.9 Da

IEP (calculated)

10.030

GRAVY (calculated)

-0.345

Length

448 amino acids

Sequence
(BLAST)

001: MSFRSIVRDV RDGFGSLSRR SFEVTLASLY GLTGHHKGKT QSSLDELDDS PAIIPESRWA SLPPELLREV IRRLEADEST WPSRRNVVCF AAVCRTWREM
101: CKETVLSPEF CGKLTFPVSI KQPGPRDGMI QCYIKRNRSK STYHLYLCLS NVVTAEGGKF VLAAKRHRKT TCTEYTISMV SGNISRSSRT NIGKLRSNFL
201: GTKFIIYDTQ PPYNGAVVPH VGRTSKRFNS TKVSPKVPSV TYNIAQVSYE LNVLGTRGPR RMRCMMHSIP ASSVEPGGIV PGQPEQIVPR ALEDSFRSTT
301: SFSQSFRSTT SFSKSIMDPS MDFSSARFSD ISGSIMGGDD NGEIKERPLV LRNKPPRWHE QLQCWCLNFR GRVTIASVKN FQLVAAPSPP PAGAPTPSQP
401: GPADPEKVIL QFGKVARDMF TMDYRYPLSA FQAFAICLSS FDTKLACE

Best Arabidopsis Sequence Match ( AT1G76900.2 )
(BLAST)

001: MSFRSIVRDV RDSIGSLSRR SFDFKLSSLN KEGGKSRGSV QDSHEEQLVV TIQETPWANL PPELLRDVIK RLEESESVWP ARRHVVACAS VCRSWRDMCK
101: EIVQSPELSG KITFPVSLKQ PGPRDATMQC FIKRDKSNLT YHLYLCLSPA LLVENGKFLL SAKRIRRTTY TEYVISMHAD TISRSSNTYI GKIRSNFLGT
201: KFIIYDTQPA YNSNIARAVQ PVGLSRRFYS KRVSPKVPSG SYKIAQVSYE LNVLGTRGPR RMHCAMNSIP ASSLAEGGTV PGQPDIIVPR SILDESFRSI
301: TSSSSRKITY DYSNDFSSAR FSDILGPLSE DQEVVLEEGK ERNSPPLVLK NKPPRWHEQL QCWCLNFRGR VTVASVKNFQ LIAANQPQPQ PQPQPQPQPL
401: TQPQPSGQTD GPDKIILQFG KVGKDMFTMD FRYPLSAFQA FAICLSSFDT KLACE

Arabidopsis Description

TULP1Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:A0A178WI43]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.