Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- nucleus 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0351400-01 | Rice | cytosol | 38.46 | 21.96 |
| Os07t0667000-01 | Rice | cytosol | 31.95 | 13.3 |
| Os01t0866800-01 | Rice | mitochondrion | 30.18 | 11.38 |
| Os05t0437900-01 | Rice | mitochondrion | 28.4 | 10.79 |
| Os02t0705300-01 | Rice | cytosol | 27.22 | 10.75 |
| Os04t0687900-01 | Rice | cytosol | 28.4 | 10.39 |
| Os12t0163400-01 | Rice | cytosol | 27.22 | 10.34 |
| KRH15179 | Soybean | cytosol | 24.85 | 9.93 |
| VIT_18s0001g12660.t01 | Wine grape | cytosol | 23.67 | 9.62 |
| Os08t0103300-01 | Rice | mitochondrion | 25.44 | 9.53 |
| KRH05837 | Soybean | mitochondrion | 24.26 | 9.03 |
| Os05t0560400-00 | Rice | cytosol | 18.34 | 8.81 |
| Os01t0674500-01 | Rice | cytosol | 17.75 | 8.43 |
| Os01t0759100-01 | Rice | cytosol, plastid | 16.57 | 7.61 |
| Os05t0514300-01 | Rice | mitochondrion | 16.57 | 7.53 |
| Os11t0163600-01 | Rice | cytosol, mitochondrion | 5.92 | 5.95 |
| Os02t0179400-00 | Rice | nucleus | 5.92 | 2.42 |
Protein Annotations
| EnsemblPlants:Os03t0348500-00 | EnsemblPlantsGene:Os03g0348500 | PANTHER:PTHR16517 | PANTHER:PTHR16517:SF36 | ProteinID:BAS84181.1 | SEG:seg |
| UniParc:UPI0003938C2C | UniProt:A0A0P0VY81 | MapMan:15.5.21 | : | : | : |
Description
Similar to cDNA clone:J033091L01, full insert sequence. (Os03t0348500-00)
Coordinates
chr3:+:13083595..13086627
Molecular Weight (calculated)
18349.1 Da
IEP (calculated)
10.435
GRAVY (calculated)
-0.259
Length
169 amino acids
Sequence
(BLAST)
(BLAST)
001: MFVVTVGGSS VMDLVVVVQD GFVVDGHASS PRVVADMVLK RRFRRGDDGD GGGGFRVVRD GDDGGEGRQR RRGGPRRMSC IMDSIPASAV QEGGKAPTQT
101: EFPLSGLDSF PSISFFRSKS PRIEIVQLYN YLLRRKKSWF RRINLLGGMS NCNDGASTSV DGHGLLLPL
101: EFPLSGLDSF PSISFFRSKS PRIEIVQLYN YLLRRKKSWF RRINLLGGMS NCNDGASTSV DGHGLLLPL
001: MSFKSLIQDM RGELGSISRK GFDVRFGYGR SRSQRVVQDT SVPVDAFKQS CWASMPPELL RDVLMRIEQS EDTWPSRKNV VSCAGVCRNW REIVKEIVRV
101: PELSSKLTFP ISLKQPGPRG SLVQCYIMRN RSNQTYYLYL GLNQAAASND DGKFLLAAKR FRRPTCTDYI ISLNCDDVSR GSNTYIGKLR SNFLGTKFTV
201: YDAQPTNPGT QVTRTRSSRL LSLKQVSPRI PSGNYPVAHI SYELNVLGSR GPRRMQCVMD AIPASAVEPG GTAPTQTELV HSNLDSFPSF SFFRSKSIRA
301: ESLPSGPSSA AQKEGLLVLK NKAPRWHEQL QCWCLNFNGR VTVASVKNFQ LVAAPENGPA GPEHENVILQ FGKVGKDVFT MDYQYPISAF QAFTICLSSF
401: DTKIACE
101: PELSSKLTFP ISLKQPGPRG SLVQCYIMRN RSNQTYYLYL GLNQAAASND DGKFLLAAKR FRRPTCTDYI ISLNCDDVSR GSNTYIGKLR SNFLGTKFTV
201: YDAQPTNPGT QVTRTRSSRL LSLKQVSPRI PSGNYPVAHI SYELNVLGSR GPRRMQCVMD AIPASAVEPG GTAPTQTELV HSNLDSFPSF SFFRSKSIRA
301: ESLPSGPSSA AQKEGLLVLK NKAPRWHEQL QCWCLNFNGR VTVASVKNFQ LVAAPENGPA GPEHENVILQ FGKVGKDVFT MDYQYPISAF QAFTICLSSF
401: DTKIACE
Arabidopsis Description
AtTLP3TLP3 [Source:UniProtKB/TrEMBL;Acc:A0A178VYB2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.