Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 3
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os05t0514300-01 | Rice | mitochondrion | 62.77 | 62.1 |
| GSMUA_Achr7P25250_001 | Banana | cytosol | 53.26 | 61.64 |
| GSMUA_Achr3P31460_001 | Banana | cytosol | 53.26 | 61.25 |
| GSMUA_Achr4P01150_001 | Banana | cytosol | 50.82 | 58.62 |
| Os01t0674500-01 | Rice | cytosol | 56.52 | 58.43 |
| Os05t0560400-00 | Rice | cytosol | 54.35 | 56.82 |
| CDY02510 | Canola | cytosol | 48.1 | 55.14 |
| CDY25719 | Canola | cytosol | 48.37 | 53.94 |
| GSMUA_Achr4P10540_001 | Banana | mitochondrion | 55.98 | 53.65 |
| GSMUA_Achr10P... | Banana | mitochondrion | 53.26 | 52.97 |
| KRH27356 | Soybean | mitochondrion | 52.99 | 51.59 |
| KRH21960 | Soybean | mitochondrion | 52.72 | 50.92 |
| PGSC0003DMT400018209 | Potato | mitochondrion | 52.45 | 50.0 |
| AT1G53320.1 | Thale cress | mitochondrion | 51.36 | 49.87 |
| CDY25863 | Canola | cytosol, mitochondrion | 51.09 | 49.87 |
| Bra041095.1-P | Field mustard | cytosol, mitochondrion | 51.09 | 49.87 |
| GSMUA_Achr7P13870_001 | Banana | mitochondrion, plastid | 39.95 | 49.83 |
| Solyc07g062390.2.1 | Tomato | mitochondrion | 52.17 | 49.74 |
| CDY45927 | Canola | cytosol, plastid | 50.54 | 49.6 |
| Bra030942.1-P | Field mustard | mitochondrion | 51.9 | 48.72 |
| VIT_19s0014g01250.t01 | Wine grape | mitochondrion | 52.99 | 48.63 |
| Os03t0351400-01 | Rice | cytosol | 35.05 | 43.58 |
| Os07t0667000-01 | Rice | cytosol | 46.74 | 42.36 |
| Os02t0705300-01 | Rice | cytosol | 45.38 | 39.02 |
| Os05t0437900-01 | Rice | mitochondrion | 45.11 | 37.3 |
| Os12t0163400-01 | Rice | cytosol | 43.75 | 36.18 |
| Os08t0103300-01 | Rice | mitochondrion | 44.29 | 36.14 |
| Os01t0866800-01 | Rice | mitochondrion | 43.48 | 35.71 |
| Os04t0687900-01 | Rice | cytosol | 44.57 | 35.5 |
| Os11t0163600-01 | Rice | cytosol, mitochondrion | 12.5 | 27.38 |
| Os03t0348500-00 | Rice | extracellular | 7.61 | 16.57 |
| Os02t0179400-00 | Rice | nucleus | 13.04 | 11.62 |
Protein Annotations
| MapMan:15.5.21 | Gene3D:3.20.90.10 | EntrezGene:4325610 | EMBL:AK106853 | ProteinID:BAB61197.1 | ProteinID:BAB90233.1 |
| ProteinID:BAF06222.1 | ProteinID:BAS74438.1 | ProteinID:EEE55409.1 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008289 | GO:GO:0035091 | InterPro:IPR001810 | InterPro:IPR025659 |
| EnsemblPlantsGene:Os01g0759100 | EnsemblPlants:Os01t0759100-01 | PFAM:PF00646 | PFAM:PF01167 | PRINTS:PR01573 | PANTHER:PTHR16517 |
| PANTHER:PTHR16517:SF32 | UniProt:Q94DT9 | SUPFAM:SSF54518 | SUPFAM:SSF81383 | InterPro:Tubby-like_C | InterPro:Tubby_C |
| UniParc:UPI00000A0712 | RefSeq:XP_015635936.1 | SEG:seg | : | : | : |
Description
tubby-like protein 12, tubby-like protein 2, F-box protein 39Tubby family protein. (Os01t0759100-01)
Coordinates
chr1:-:31927136..31930005
Molecular Weight (calculated)
40878.8 Da
IEP (calculated)
9.781
GRAVY (calculated)
-0.383
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: MVPWRRSSSS SSAPSSRPAR RPARTNARVS PDVSSELSPL AGEEGAGEER WSALVPDLLA DILRCVEAGS ERWPPRRDVV ACASVCRRWR DVAVAVVQPP
101: LESGKITFPS SLKQPGPRDA PMQCFIKRNK KNSTFFLYLG LTQELTDDEK FLLAARRCRR GLHKEYAITI NSDGLFHGSQ SCVGNLKSNF TGTKFTIRDW
201: QPPYEGAKAF SSRSGRWFGN KHRCPLVSTG DVEVGEVSYK YSLLRPRGPR RMSCSVQCPV LKGTAVDPQD GKRLSNSIPS SLVLNSKVPS WHEHLQCWCL
301: NFHGRVMVAS VKNFQLIAPV EPGEPSDKTV VLQFGKIDDD VFTMDYRQPL SAFQAFAICL SNFGTKLA
101: LESGKITFPS SLKQPGPRDA PMQCFIKRNK KNSTFFLYLG LTQELTDDEK FLLAARRCRR GLHKEYAITI NSDGLFHGSQ SCVGNLKSNF TGTKFTIRDW
201: QPPYEGAKAF SSRSGRWFGN KHRCPLVSTG DVEVGEVSYK YSLLRPRGPR RMSCSVQCPV LKGTAVDPQD GKRLSNSIPS SLVLNSKVPS WHEHLQCWCL
301: NFHGRVMVAS VKNFQLIAPV EPGEPSDKTV VLQFGKIDDD VFTMDYRQPL SAFQAFAICL SNFGTKLA
001: MPLSRSLLSR RISNSFRFHQ GETTTAPESE SIPPPSNMAG SSSWSAMLPE LLGEIIRRVE ETEDRWPQRR DVVTCACVSK KWREITHDFA RSSLNSGKIT
101: FPSCLKLPGP RDFSNQCLIK RNKKTSTFYL YLALTPSFTD KGKFLLAARR FRTGAYTEYI ISLDADDFSQ GSNAYVGKLR SDFLGTNFTV YDSQPPHNGA
201: KPSNGKASRR FASKQISPQV PAGNFEVGHV SYKFNLLKSR GPRRMVSTLR CPSPSPSSSS AGLSSDQKPC DVTKIMKKPN KDGSSLTILK NKAPRWHEHL
301: QCWCLNFHGR VTVASVKNFQ LVATVDQSQP SGKGDEETVL LQFGKVGDDT FTMDYRQPLS AFQAFAICLT SFGTKLACE
101: FPSCLKLPGP RDFSNQCLIK RNKKTSTFYL YLALTPSFTD KGKFLLAARR FRTGAYTEYI ISLDADDFSQ GSNAYVGKLR SDFLGTNFTV YDSQPPHNGA
201: KPSNGKASRR FASKQISPQV PAGNFEVGHV SYKFNLLKSR GPRRMVSTLR CPSPSPSSSS AGLSSDQKPC DVTKIMKKPN KDGSSLTILK NKAPRWHEHL
301: QCWCLNFHGR VTVASVKNFQ LVATVDQSQP SGKGDEETVL LQFGKVGDDT FTMDYRQPLS AFQAFAICLT SFGTKLACE
Arabidopsis Description
TULP7Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:A0A178WNG9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.