Factsheet for TraesCS2D01G584900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

cytosol 2
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G574000.1	Wheat	golgi	99.36	98.94
TraesCS2B01G613800.1	Wheat	mitochondrion, nucleus	99.36	98.73
Os04t0687900-01	Rice	cytosol	78.04	79.22
Zm00001d002896_P001	Maize	cytosol	71.64	76.36
OQU82627	Sorghum	cytosol	73.13	75.72
HORVU2Hr1G124880.1	Barley	plastid	97.65	73.75
TraesCS7D01G323100.1	Wheat	mitochondrion	70.58	72.27
TraesCS1D01G273200.1	Wheat	mitochondrion	64.39	66.52
TraesCS3D01G371600.1	Wheat	mitochondrion	60.77	63.47
TraesCS4D01G110100.1	Wheat	golgi	58.21	62.05
TraesCS5D01G132000.1	Wheat	cytosol, mitochondrion	57.36	61.28
TraesCS4D01G164200.1	Wheat	cytosol, plastid	46.27	53.71
TraesCS2D01G122900.1	Wheat	cytosol	42.22	52.94
TraesCS6D01G252800.1	Wheat	cytosol	45.63	50.35
TraesCS3D01G270500.1	Wheat	cytosol	37.74	49.86
TraesCS1D01G336400.1	Wheat	mitochondrion	37.74	47.07
TraesCS6D01G138700.1	Wheat	plastid	14.29	17.18

Protein Annotations

Gene3D:1.20.1280.50	MapMan:15.5.21	Gene3D:3.20.90.10	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001810	InterPro:IPR025659	PFAM:PF00646	PFAM:PF01167
PRINTS:PR01573	ScanProsite:PS01200	ScanProsite:PS01201	PANTHER:PTHR16517	PANTHER:PTHR16517:SF38	SUPFAM:SSF54518
SUPFAM:SSF81383	EnsemblPlantsGene:TraesCS2D01G584900	EnsemblPlants:TraesCS2D01G584900.1	InterPro:Tubby-like_C	InterPro:Tubby_C	InterPro:Tubby_C_CS
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2D:+:644094052..644096004

Molecular Weight (calculated)

51874.3 Da

IEP (calculated)

9.450

GRAVY (calculated)

-0.530

Length

469 amino acids

Sequence
(BLAST)

001: MTLRSIVRDL RESFGNLSRR NFEAKISSVP SLSGHHRGKS LESASDLQDS LVTNLQGNWA SLPPELLRDV MKRLEEDDSN WPSRKDVVAC ASVCTTWREM
101: CKDIVRNPEF CGKLTFPVSL KQPGSRDGLI QCFIKRDKSK LTYRLYLSLT SAVLDDNGKF LLSAKRSRRT TYTDYAISMD PKNISRSSSG YIGKLRSNFL
201: GTKFIIYDTQ PPYNASKLCP QERTSRRFSS RKVSPKVPAA TGSYPIAQVN YELNVLGTRG PRRMQCTMNS IPTSAVDPDG VVPGQPKELL PRLFEESFRT
301: TASSRYSTDF SSCRFSEFGG GPLREEGGDE NAGDKESPLV LKNKSPRWHE QLQCWCLNFR GRVTVASVKN FQLIAAPAPP PPASGGEAAP EPSSQTQPPQ
401: QQPTSAAAQP QPAGSSLSAS SSSSHHDTVL LQFGKVSKDT FTMDYRYPLS AFQAFAICLT SFDTKLACE

Best Arabidopsis Sequence Match ( AT1G25280.1 )
(BLAST)

001: MSFRGIVQDL RDGFGSLSRR SFDFRLSSLH KGKAQGSSFR EYSSSRDLLS PVIVQTSRWA NLPPELLFDV IKRLEESESN WPARKHVVAC ASVCRSWRAM
101: CQEIVLGPEI CGKLTFPVSL KQPGPRDAMI QCFIKRDKSK LTFHLFLCLS PALLVENGKF LLSAKRTRRT TRTEYIISMD ADNISRSSNS YLGKLRSNFL
201: GTKFLVYDTQ PPPNTSSSAL ITDRTSRSRF HSRRVSPKVP SGSYNIAQIT YELNVLGTRG PRRMHCIMNS IPISSLEPGG SVPNQPEKLV PAPYSLDDSF
301: RSNISFSKSS FDHRSLDFSS SRFSEMGISC DDNEEEASFR PLILKNKQPR WHEQLQCWCL NFRGRVTVAS VKNFQLVAAR QPQPQGTGAA AAPTSAPAHP
401: EQDKVILQFG KVGKDMFTMD YRYPLSAFQA FAICLSSFDT KLACE

Arabidopsis Description

TULP10Tubby-like F-box protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9FRH7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.