Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 3
- nucleus 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
golgi:
26860054
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS2D01G584900.1 | Wheat | cytosol, mitochondrion | 98.94 | 99.36 |
TraesCS2B01G613800.1 | Wheat | mitochondrion, nucleus | 98.73 | 98.52 |
Os04t0687900-01 | Rice | cytosol | 77.92 | 79.44 |
Zm00001d002896_P001 | Maize | cytosol | 71.34 | 76.36 |
OQU82627 | Sorghum | cytosol | 73.25 | 76.16 |
HORVU2Hr1G124880.1 | Barley | plastid | 97.24 | 73.75 |
TraesCS7A01G326400.1 | Wheat | golgi | 70.28 | 72.59 |
TraesCS1A01G273100.1 | Wheat | mitochondrion | 64.33 | 66.45 |
TraesCS3A01G378300.1 | Wheat | mitochondrion | 60.51 | 63.47 |
TraesCS4A01G209000.1 | Wheat | cytosol, mitochondrion | 57.96 | 62.05 |
TraesCS5A01G124100.1 | Wheat | cytosol | 57.75 | 61.96 |
TraesCS4A01G140800.1 | Wheat | cytosol, plastid | 45.44 | 53.23 |
TraesCS2A01G120900.1 | Wheat | mitochondrion | 42.04 | 52.66 |
TraesCS6A01G272800.1 | Wheat | cytosol | 45.65 | 50.12 |
TraesCS3A01G270800.1 | Wheat | cytosol | 37.58 | 49.86 |
TraesCS1A01G333900.1 | Wheat | mitochondrion | 37.79 | 47.72 |
TraesCS6A01G149400.1 | Wheat | plastid | 14.44 | 17.0 |
Protein Annotations
Gene3D:1.20.1280.50 | MapMan:15.5.21 | Gene3D:3.20.90.10 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 |
GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001810 | InterPro:IPR025659 | PFAM:PF00646 | PFAM:PF01167 |
PRINTS:PR01573 | ScanProsite:PS01200 | ScanProsite:PS01201 | PANTHER:PTHR16517 | PANTHER:PTHR16517:SF38 | SUPFAM:SSF54518 |
SUPFAM:SSF81383 | EnsemblPlantsGene:TraesCS2A01G574000 | EnsemblPlants:TraesCS2A01G574000.1 | InterPro:Tubby-like_C | InterPro:Tubby_C | InterPro:Tubby_C_CS |
SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr2A:+:769220060..769223904
Molecular Weight (calculated)
52100.6 Da
IEP (calculated)
9.450
GRAVY (calculated)
-0.529
Length
471 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLRSIVRDL RESFGNLSRR NFEAKISSVP SLSGHHRGKS LESASDLQDS LVTNLQGNWA SLPPELLRDV MKRLEEDDSN WPSRKDVVAC ASVCTTWREM
101: CKDIVRNPEF CGKLTFPVSL KQPGSRDGLI QCFIKRDKSK LTYRLYLSLT SAVLDDNGKF LLSAKRSRRT TYTDYAISMD PKNISRSSSG YIGKLRSNFL
201: GTKFIIYDTQ PPYNASKLCP QERTSRRFSS RKVSPKVPAA TGSYPIAQVN YELNVLGTRG PRRMQCTMNS IPTSAVDPDG VVPGQPKELL PRLFEESFRT
301: TASSRYSTDF SSCRFSEFGG GPLREEGGDE NAGDKESPLV LKNKSPRWHE QLQCWCLNFR GRVTVASVKN FQLIAAPAPP PPASGGEAAP EPSLQPQPPQ
401: QQPTSATAQP QPAGSSLSAS SSSSSSHHDT VLLQFGKVSK DTFTMDYRYP LSAFQAFAIC LTSFDTKLAC E
101: CKDIVRNPEF CGKLTFPVSL KQPGSRDGLI QCFIKRDKSK LTYRLYLSLT SAVLDDNGKF LLSAKRSRRT TYTDYAISMD PKNISRSSSG YIGKLRSNFL
201: GTKFIIYDTQ PPYNASKLCP QERTSRRFSS RKVSPKVPAA TGSYPIAQVN YELNVLGTRG PRRMQCTMNS IPTSAVDPDG VVPGQPKELL PRLFEESFRT
301: TASSRYSTDF SSCRFSEFGG GPLREEGGDE NAGDKESPLV LKNKSPRWHE QLQCWCLNFR GRVTVASVKN FQLIAAPAPP PPASGGEAAP EPSLQPQPPQ
401: QQPTSATAQP QPAGSSLSAS SSSSSSHHDT VLLQFGKVSK DTFTMDYRYP LSAFQAFAIC LTSFDTKLAC E
001: MSFRGIVQDL RDGFGSLSRR SFDFRLSSLH KGKAQGSSFR EYSSSRDLLS PVIVQTSRWA NLPPELLFDV IKRLEESESN WPARKHVVAC ASVCRSWRAM
101: CQEIVLGPEI CGKLTFPVSL KQPGPRDAMI QCFIKRDKSK LTFHLFLCLS PALLVENGKF LLSAKRTRRT TRTEYIISMD ADNISRSSNS YLGKLRSNFL
201: GTKFLVYDTQ PPPNTSSSAL ITDRTSRSRF HSRRVSPKVP SGSYNIAQIT YELNVLGTRG PRRMHCIMNS IPISSLEPGG SVPNQPEKLV PAPYSLDDSF
301: RSNISFSKSS FDHRSLDFSS SRFSEMGISC DDNEEEASFR PLILKNKQPR WHEQLQCWCL NFRGRVTVAS VKNFQLVAAR QPQPQGTGAA AAPTSAPAHP
401: EQDKVILQFG KVGKDMFTMD YRYPLSAFQA FAICLSSFDT KLACE
101: CQEIVLGPEI CGKLTFPVSL KQPGPRDAMI QCFIKRDKSK LTFHLFLCLS PALLVENGKF LLSAKRTRRT TRTEYIISMD ADNISRSSNS YLGKLRSNFL
201: GTKFLVYDTQ PPPNTSSSAL ITDRTSRSRF HSRRVSPKVP SGSYNIAQIT YELNVLGTRG PRRMHCIMNS IPISSLEPGG SVPNQPEKLV PAPYSLDDSF
301: RSNISFSKSS FDHRSLDFSS SRFSEMGISC DDNEEEASFR PLILKNKQPR WHEQLQCWCL NFRGRVTVAS VKNFQLVAAR QPQPQGTGAA AAPTSAPAHP
401: EQDKVILQFG KVGKDMFTMD YRYPLSAFQA FAICLSSFDT KLACE
Arabidopsis Description
TULP10Tubby-like F-box protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9FRH7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.