CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH08239	Soybean	cytosol	94.44	94.44
KRH76777	Soybean	cytosol	81.88	81.69
KRH28692	Soybean	cytosol	81.64	81.64
VIT_04s0023g01950.t01	Wine grape	cytosol	78.5	78.69
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, nucleus, plastid	32.61	75.84
GSMUA_Achr2P23080_001	Banana	cytosol	24.64	75.0
PGSC0003DMT400016310	Potato	cytosol	71.98	74.31
Solyc04g071750.2.1	Tomato	cytosol	71.74	74.25
PGSC0003DMT400058090	Potato	cytosol	72.71	74.14
Solyc03g033980.2.1	Tomato	cytosol	72.46	73.89
PGSC0003DMT400009280	Potato	cytosol	71.98	73.22
Solyc02g085130.2.1	Tomato	cytosol	72.22	72.75
GSMUA_Achr6P09030_001	Banana	cytosol	62.56	71.55
PGSC0003DMT400040088	Potato	cytosol	70.77	71.46
Solyc02g062670.2.1	Tomato	cytosol	70.53	71.05
CDY46301	Canola	cytosol	60.63	66.4
Bra039620.1-P	Field mustard	cytosol	60.63	66.4
CDY25159	Canola	cytosol	59.9	66.13
KRH15179	Soybean	cytosol	66.43	65.01
AT2G18280.2	Thale cress	cytosol	61.59	64.72
TraesCS6B01G300200.1	Wheat	cytosol	66.43	64.55
TraesCS6A01G272800.1	Wheat	cytosol	66.67	64.34
TraesCS6D01G252800.1	Wheat	cytosol	65.94	64.24
HORVU6Hr1G068970.3	Barley	cytosol	65.94	63.93
GSMUA_Achr2P22940_001	Banana	cytosol	56.04	63.22
EES07397	Sorghum	cytosol	65.94	63.05
Zm00001d051568_P001	Maize	cytosol	65.46	62.16
Zm00001d017773_P001	Maize	cytosol	65.22	61.78
KRH05837	Soybean	mitochondrion	66.43	60.57
KRH21017	Soybean	mitochondrion	40.82	58.28
CDY17028	Canola	mitochondrion, nucleus	55.07	57.72
Bra040862.1-P	Field mustard	mitochondrion, nucleus	55.07	57.58
CDY65687	Canola	cytosol, mitochondrion	51.69	57.22
Bra015624.1-P	Field mustard	cytosol, mitochondrion	55.56	57.07
AT1G47270.1	Thale cress	nucleus	56.52	56.66
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	40.58	56.57
KRH11270	Soybean	cytosol	51.21	55.06
KRH10476	Soybean	cytosol, mitochondrion	56.04	54.33
KRH71532	Soybean	cytosol	52.42	54.25
KRH43964	Soybean	cytosol, mitochondrion	55.56	53.86
KRH50928	Soybean	cytosol	46.62	53.76
CDY10578	Canola	mitochondrion	5.31	52.38
KRH35144	Soybean	cytosol, mitochondrion	54.35	52.33
KRH21960	Soybean	mitochondrion	48.07	52.23
KRH08694	Soybean	mitochondrion	53.14	51.89
KRH70303	Soybean	cytosol	53.14	51.89
KRG91652	Soybean	cytosol, mitochondrion	53.86	51.86
KRH27356	Soybean	mitochondrion	47.34	51.85
KRH02194	Soybean	cytosol	47.34	50.0
KRH49321	Soybean	cytosol	20.53	46.45
KRH21016	Soybean	cytosol	11.11	46.0
GSMUA_Achr2P23070_001	Banana	cytosol, mitochondrion	21.74	45.69
GSMUA_Achr10P...	Banana	nucleus	21.74	42.86
CDY06747	Canola	cytosol, mitochondrion	52.42	37.54
Zm00001d033948_P004	Maize	cytosol	14.49	33.15
KRH25611	Soybean	cytosol	22.46	31.53
KRH23693	Soybean	plastid	18.84	21.91

Protein Annotations

EntrezGene:100805380	MapMan:15.5.21	Gene3D:3.20.90.10	EMBL:ACUP02000734	InterPro:F-box-like_dom_sf	InterPro:F-box_dom
EnsemblPlantsGene:GLYMA_02G055300	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0008289	GO:GO:0035091
UniProt:I1JCN8	InterPro:IPR001810	InterPro:IPR025659	EnsemblPlants:KRH69894	ProteinID:KRH69894	ProteinID:KRH69894.1
ProteinID:KRH69895.1	ProteinID:KRH69896.1	PFAM:PF00646	PFAM:PF01167	PRINTS:PR01573	ScanProsite:PS01200
ScanProsite:PS01201	PANTHER:PTHR16517	PANTHER:PTHR16517:SF74	SUPFAM:SSF54518	SUPFAM:SSF81383	InterPro:Tubby-like_C
InterPro:Tubby_C	InterPro:Tubby_C_CS	UniParc:UPI00023BDA4A	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:4997177..5000647

Molecular Weight (calculated)

46046.0 Da

IEP (calculated)

9.185

GRAVY (calculated)

-0.308

Length

414 amino acids

Sequence
(BLAST)

001: MSLRSIVREL KEMRDGIGST SKRGAESKHR LSRTKSHVAP DVLATPFEPI QQGQWANLPS ELLLDIIQRV EESETSWPAR AVVVFCASVC KSWRSITREI
101: VKTPEQCGRI TFPISLKQPG PRDSPIQCFI RRNKETSTYL LYFGLVPSEN DSNKLLLAAK RIRRATGTGF VISLAADDFS RASNKYVGKL RSNFLGTKFT
201: VYDSQAPHDS AIQSNCQSSR RFHSKQVSPR VPACSYLVST VSYELNVLCT RGPRRMHCVM NSIPVSAIQE GGNAPTPTSF PQIFDEPFSP SPALKEKAQV
301: TDLNSASLSE PPVLSQGSTE QLALKNKAPR WHEQLQCWCL NFKGRVSVAS VKNFQLVAAV DPSHNISAEE QEKVILQFGK IGKDIFTMDY CYPLSTFQAF
401: AICLSSFDTK PACE

Best Arabidopsis Sequence Match ( AT1G47270.1 )
(BLAST)

001: MDLSLLLPKR SWEISGGADK ISRVAMSLKN IVKNKYKAIG RRGRSHIAPE GSSVSSSLST NEGLNQSIWV DLPPELLLDI IQRIESEQSL WPGRRDVVAC
101: ASVCKSWREM TKEVVKVPEL SGLITFPISL RQPGPRDAPI QCFIKRERAT GIYRLYLGLS PALSGDKSKL LLSAKRVRRA TGAEFVVSLS GNDFSRSSSN
201: YIGKLRSNFL GTKFTVYENQ PPPFNRKLPP SMQVSPWVSS SSSSYNIASI LYELNVLRTR GPRRMQCIMH SIPISAIQEG GKIQSPTEFT NQGKKKKKPL
301: MDFCSGNLGG ESVIKEPLIL KNKSPRWHEQ LQCWCLNFKG RVTVASVKNF QLVAAAAEAG KNMNIPEEEQ DRVILQFGKI GKDIFTMDYR YPISAFQAFA
401: ICLSSFDTKP VCE

Arabidopsis Description

TULP6Tubby-like F-box protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q0WPY0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.