CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
nucleus 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH02194	Soybean	cytosol	92.48	84.69
KRH21017	Soybean	mitochondrion	63.51	78.62
VIT_05s0020g01930.t01	Wine grape	cytosol	69.36	71.14
KRH11270	Soybean	cytosol	75.77	70.65
PGSC0003DMT400027634	Potato	cytosol	67.97	62.89
KRH71532	Soybean	cytosol	67.41	60.5
Solyc01g067680.2.1	Tomato	cytosol	38.72	55.82
KRH21016	Soybean	cytosol	14.21	51.0
KRH28692	Soybean	cytosol	55.99	48.55
KRH76777	Soybean	cytosol	54.87	47.47
KRH08694	Soybean	mitochondrion	55.43	46.93
KRH08239	Soybean	cytosol	53.76	46.62
KRH69894	Soybean	cytosol	53.76	46.62
KRH10476	Soybean	cytosol, mitochondrion	55.15	46.37
KRH27356	Soybean	mitochondrion	48.75	46.3
KRH70303	Soybean	cytosol	54.6	46.23
KRH21960	Soybean	mitochondrion	49.03	46.19
KRH15179	Soybean	cytosol	54.32	46.1
KRG91652	Soybean	cytosol, mitochondrion	55.15	46.05
KRH35144	Soybean	cytosol, mitochondrion	55.15	46.05
KRH43964	Soybean	cytosol, mitochondrion	54.6	45.9
KRH05837	Soybean	mitochondrion	54.04	42.73
KRH49321	Soybean	cytosol	21.73	42.62
AT1G61940.2	Thale cress	cytosol	27.02	36.6
KRH25611	Soybean	cytosol	27.58	33.56
KRH23693	Soybean	plastid	20.06	20.22

Protein Annotations

EntrezGene:100794141	MapMan:15.5.21	Gene3D:3.20.90.10	EMBL:ACUP02004719	InterPro:F-box_dom	EnsemblPlantsGene:GLYMA_07G251800
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0008289	GO:GO:0035091	InterPro:IPR001810
InterPro:IPR025659	UniProt:K7L3S0	ProteinID:KRH50927.1	EnsemblPlants:KRH50928	ProteinID:KRH50928	ProteinID:KRH50928.1
ProteinID:KRH50929.1	PFAM:PF00646	PFAM:PF01167	PRINTS:PR01573	ScanProsite:PS01200	PANTHER:PTHR16517
PANTHER:PTHR16517:SF73	SUPFAM:SSF54518	InterPro:Tubby-like_C	InterPro:Tubby_C	InterPro:Tubby_C_CS	UniParc:UPI0002338D9A
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:42925488..42932582

Molecular Weight (calculated)

40222.3 Da

IEP (calculated)

8.967

GRAVY (calculated)

-0.184

Length

359 amino acids

Sequence
(BLAST)

001: MEQSWRANMP RELLREVLLR IESSEATWPS RRSVVACGGV CRTWRLIVKE IVKPPQLSSN ITFPISLKQP GPREHLLQCF IRRNSATQTY YLFLSLSSAL
101: IADDGKFLLA ARKFRRPTCI DYIISLDADD MSRESNAYVG KLRSNFLGTK FTIYDIPLPH VGAKMTKSCF TKLVNPKQVS PRVPTGNYPV AHISYELNVL
201: GSRGPRRMHC VMDTIPASAI EPGGVAVAPS QTDFSVSNID TSFPFFQTNS TSLENSISGD QRNKKDDVLV LRNKAARWHE QLECWCLNFH GRVTIASVKN
301: FQLAVSPENG HAGPQEDEVI LQFGKVGKDL FTMDYRYPIS AFQAFAICLS SFATTVACE

Best Arabidopsis Sequence Match ( AT2G47900.1 )
(BLAST)

001: MSFKSLIQDM RGELGSISRK GFDVRFGYGR SRSQRVVQDT SVPVDAFKQS CWASMPPELL RDVLMRIEQS EDTWPSRKNV VSCAGVCRNW REIVKEIVRV
101: PELSSKLTFP ISLKQPGPRG SLVQCYIMRN RSNQTYYLYL GLNQAASNDD GKFLLAAKRF RRPTCTDYII SLNCDDVSRG SNTYIGKLRS NFLGTKFTVY
201: DAQPTNPGTQ VTRTRSSRLL SLKQVSPRIP SGNYPVAHIS YELNVLGSRG PRRMQCVMDA IPASAVEPGG TAPTQTELVH SNLDSFPSFS FFRSKSIRAE
301: SLPSGPSSAA QKEGLLVLKN KAPRWHEQLQ CWCLNFNGRV TVASVKNFQL VAAPENGPAG PEHENVILQF GKVGKDVFTM DYQYPISAFQ AFTICLSSFD
401: TKIACE

Arabidopsis Description

AtTLP3TLP3 [Source:UniProtKB/TrEMBL;Acc:A0A178VYB2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.