Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Solyc01g067680.2.1 | Tomato | cytosol | 56.0 | 22.49 |
KRH11270 | Soybean | cytosol | 85.0 | 22.08 |
KRH49321 | Soybean | cytosol | 40.0 | 21.86 |
AT1G61940.2 | Thale cress | cytosol | 44.0 | 16.6 |
KRH71532 | Soybean | cytosol | 63.0 | 15.75 |
PGSC0003DMT400027634 | Potato | cytosol | 57.0 | 14.69 |
KRH50928 | Soybean | cytosol | 51.0 | 14.21 |
KRH25611 | Soybean | cytosol | 41.0 | 13.9 |
KRH02194 | Soybean | cytosol | 51.0 | 13.01 |
VIT_05s0020g01930.t01 | Wine grape | cytosol | 45.0 | 12.86 |
KRH08239 | Soybean | cytosol | 47.0 | 11.35 |
KRG91652 | Soybean | cytosol, mitochondrion | 48.0 | 11.16 |
KRH35144 | Soybean | cytosol, mitochondrion | 48.0 | 11.16 |
KRH69894 | Soybean | cytosol | 46.0 | 11.11 |
KRH08694 | Soybean | mitochondrion | 47.0 | 11.08 |
KRH43964 | Soybean | cytosol, mitochondrion | 46.0 | 10.77 |
KRH10476 | Soybean | cytosol, mitochondrion | 46.0 | 10.77 |
KRH28692 | Soybean | cytosol | 44.0 | 10.63 |
KRH76777 | Soybean | cytosol | 44.0 | 10.6 |
KRH15179 | Soybean | cytosol | 44.0 | 10.4 |
KRH70303 | Soybean | cytosol | 44.0 | 10.38 |
KRH05837 | Soybean | mitochondrion | 45.0 | 9.91 |
KRH21960 | Soybean | mitochondrion | 35.0 | 9.19 |
KRH27356 | Soybean | mitochondrion | 33.0 | 8.73 |
KRH23693 | Soybean | plastid | 12.0 | 3.37 |
KRH21017 | Soybean | mitochondrion | 0.0 | 0.0 |
Protein Annotations
EMBL:ACUP02008333 | EnsemblPlants:KRH21016 | EnsemblPlantsGene:GLYMA_13G2149002 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0005488 |
GO:GO:0005515 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | PANTHER:PTHR16517 | PANTHER:PTHR16517:SF73 |
PFAM:PF00646 | ProteinID:KRH21016 | ProteinID:KRH21016.1 | SEG:seg | SUPFAM:SSF81383 | UniParc:UPI0006ED7247 |
UniProt:A0A0R0H084 | MapMan:15.5.21 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr13:+:32842156..32842899
Molecular Weight (calculated)
11328.8 Da
IEP (calculated)
9.074
GRAVY (calculated)
-0.258
Length
100 amino acids
Sequence
(BLAST)
(BLAST)
1: MGLIRSMRSR SQRVVQEQEA AECVGVVVGD SMRQSCWANM PQELLREVLL RIEASEDTWP PRKSVVSCAG VCRSWRHITK DIVKTPELSS KITFPISVKQ
001: MPPELLRDVL MRIERSEDTW PSRKNVVSCV GVCKNWRQIF KEIVNVPEVS SKFTFPISLK QEDHLFNAML RETVAIKLSI YTLEVKQKYF VSDIYLVPYS
101: YRETHCVMDA ISASAVKPGG TATTQTELDN FVSFRSPSGQ KEGVLVLKSK VPRLEEQSWC LDFNGWRDIV SSGKKFQLYE AEWIPLVRTS VFAVIARVCR
201: DKKHTPSYEL KLALYFAKNS AILKKFVLRG YTREEDLLAL PVAN
101: YRETHCVMDA ISASAVKPGG TATTQTELDN FVSFRSPSGQ KEGVLVLKSK VPRLEEQSWC LDFNGWRDIV SSGKKFQLYE AEWIPLVRTS VFAVIARVCR
201: DKKHTPSYEL KLALYFAKNS AILKKFVLRG YTREEDLLAL PVAN
Arabidopsis Description
TULP4Putative Tubby-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:O80699]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.