CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH11270	Soybean	cytosol	95.52	71.95
VIT_05s0020g01930.t01	Wine grape	cytosol	83.1	68.86
KRH50928	Soybean	cytosol	78.62	63.51
KRH02194	Soybean	cytosol	76.55	56.63
PGSC0003DMT400027634	Potato	cytosol	75.52	56.44
KRH71532	Soybean	cytosol	72.07	52.25
KRH28692	Soybean	cytosol	61.03	42.75
KRH76777	Soybean	cytosol	61.03	42.65
KRH10476	Soybean	cytosol, mitochondrion	62.76	42.62
KRH43964	Soybean	cytosol, mitochondrion	62.07	42.15
KRH27356	Soybean	mitochondrion	54.48	41.8
KRH21960	Soybean	mitochondrion	54.83	41.73
KRH08694	Soybean	mitochondrion	60.69	41.51
KRH70303	Soybean	cytosol	60.34	41.27
KRH35144	Soybean	cytosol, mitochondrion	61.03	41.16
KRG91652	Soybean	cytosol, mitochondrion	61.03	41.16
KRH69894	Soybean	cytosol	58.28	40.82
KRH08239	Soybean	cytosol	57.93	40.58
Solyc01g067680.2.1	Tomato	cytosol	34.14	39.76
KRH15179	Soybean	cytosol	56.9	39.01
KRH05837	Soybean	mitochondrion	57.59	36.78
AT1G61940.2	Thale cress	cytosol	22.76	24.91
KRH49321	Soybean	cytosol	15.52	24.59
KRH25611	Soybean	cytosol	22.07	21.69
KRH23693	Soybean	plastid	24.48	19.94
KRH21016	Soybean	cytosol	0.0	0.0

Protein Annotations

EMBL:ACUP02008334	EnsemblPlants:KRH21017	EnsemblPlantsGene:GLYMA_13G2149001	Gene3D:3.20.90.10	InterPro:IPR025659	InterPro:Tubby-like_C
InterPro:Tubby_C	InterPro:Tubby_C_CS	PANTHER:PTHR16517	PANTHER:PTHR16517:SF73	PFAM:PF01167	PRINTS:PR01573
ProteinID:KRH21017	ProteinID:KRH21017.1	ScanProsite:PS01200	ScanProsite:PS01201	SEG:seg	SUPFAM:SSF54518
UniParc:UPI00023CF01E	UniProt:I1M1C0	MapMan:15.5.21	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:32844538..32847391

Molecular Weight (calculated)

32469.2 Da

IEP (calculated)

9.765

GRAVY (calculated)

-0.290

Length

290 amino acids

Sequence
(BLAST)

001: MPGPRENLLR CFIKRNRSTQ TYYLFLSLTS TLAEDGKFLL AARKCRRPTC TDYIISLDAD DMSKGSNSYV GKLRSNFLGT KFTIYDSQLP HTGAKIMKSR
101: STRLVNLKQV SPKVPTGNYP VAHISYELNV LGSRGPRRMH CVMDSIPATA IEPGGVAPTQ TEFSLNNIDM FPSFPFFRSK SNRAENSMSG PLVDQKDGML
201: VLKNKAPRWH EQLQCWCLNF HGRVTIASVK NFQLVASAEN GPAGPEHDKI ILQFGKVGKD LFTMDYRYPI SAFQAFAICL SSFDTKIACE

Best Arabidopsis Sequence Match ( AT3G06380.2 )
(BLAST)

001: MYYMQSGPRD SLVQCFIKRN RNTQSYHLYL GLTTSLTDNG KFLLAASKLK RATCTDYIIS LRSDDISKRS NAYLGRMRSN FLGTKFTVFD GSQTGAAKMQ
101: KSRSSNFIKV SPRVPQGSYP IAHISYELNV LGSRGPRRMR CIMDTIPMSI VESRGVVAST SISSFSSRSS PVFRSHSKPL RSNSASCSDS GNNLGDPPLV
201: LSNKAPRWHE QLRCWCLNFH GRVTVASVKN FQLVAVSDCE AGQTSERIIL QFGKVGKDMF TMDYGYPISA FQAFAICLSS FETRIACE

Arabidopsis Description

TULP9Tubby-like F-box protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9SQU1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.