Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400027634 | Potato | cytosol | 91.97 | 59.02 |
KRH21016 | Soybean | cytosol | 22.49 | 56.0 |
VIT_05s0020g01930.t01 | Wine grape | cytosol | 57.03 | 40.57 |
KRH11270 | Soybean | cytosol | 61.85 | 40.0 |
KRH50928 | Soybean | cytosol | 55.82 | 38.72 |
Solyc09g074510.2.1 | Tomato | cytosol | 60.24 | 37.88 |
KRH02194 | Soybean | cytosol | 55.82 | 35.46 |
KRH21017 | Soybean | mitochondrion | 39.76 | 34.14 |
Solyc07g062390.2.1 | Tomato | mitochondrion | 44.18 | 28.5 |
Solyc10g046970.1.1 | Tomato | mitochondrion | 47.39 | 27.7 |
Solyc01g104670.2.1 | Tomato | cytosol | 47.39 | 27.63 |
Solyc04g071440.2.1 | Tomato | mitochondrion | 46.59 | 27.23 |
Solyc04g071750.2.1 | Tomato | cytosol | 43.37 | 27.0 |
Solyc02g085130.2.1 | Tomato | cytosol | 43.78 | 26.52 |
Solyc03g033980.2.1 | Tomato | cytosol | 42.97 | 26.35 |
Solyc02g062670.2.1 | Tomato | cytosol | 42.17 | 25.55 |
AT1G61940.2 | Thale cress | cytosol | 22.49 | 21.13 |
Solyc03g117730.2.1 | Tomato | cytosol | 14.86 | 9.11 |
Protein Annotations
EnsemblPlants:Solyc01g067680.2.1 | EnsemblPlantsGene:Solyc01g067680.2 | Gene3D:1.20.1280.50 | Gene3D:3.20.90.10 | GO:GO:0003674 | GO:GO:0005488 |
GO:GO:0005515 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | InterPro:IPR025659 | InterPro:Tubby-like_C |
InterPro:Tubby_C | PANTHER:PTHR16517 | PANTHER:PTHR16517:SF36 | PFAM:PF00646 | PFAM:PF01167 | PRINTS:PR01573 |
SUPFAM:SSF54518 | SUPFAM:SSF81383 | UniParc:UPI0002763167 | UniProt:K4AX16 | MapMan:15.5.21 | : |
Description
No Description!
Coordinates
chr1:-:76561051..76564258
Molecular Weight (calculated)
27740.5 Da
IEP (calculated)
9.512
GRAVY (calculated)
-0.301
Length
249 amino acids
Sequence
(BLAST)
(BLAST)
001: MKWGYGSKSR CRQSSVVAVA EETEGIDEVF VESCWANLPL ELLREVLMRI EDTESKWPLR RSVVACSGVC RSWREIMKEL VKTPEVSGKL TFPISVKQPG
101: PRDTLLQCFI KRNQTTQAYH LYLSLTQALA DDGKFLLAAR KYRKATCTDY TISLDANETS KGGGTCIGRL RSNFLGTKFT AYDSILPYAG AKLVKSRSTR
201: LVGSKQMNSR VPAGNYEVAH ISYELNVLGA RKGAKKNALC DGCYPSFCH
101: PRDTLLQCFI KRNQTTQAYH LYLSLTQALA DDGKFLLAAR KYRKATCTDY TISLDANETS KGGGTCIGRL RSNFLGTKFT AYDSILPYAG AKLVKSRSTR
201: LVGSKQMNSR VPAGNYEVAH ISYELNVLGA RKGAKKNALC DGCYPSFCH
001: MSFKSLIQDM RGELGSISRK GFDVRFGYGR SRSQRVVQDT SVPVDAFKQS CWASMPPELL RDVLMRIEQS EDTWPSRKNV VSCAGVCRNW REIVKEIVRV
101: PELSSKLTFP ISLKQPGPRG SLVQCYIMRN RSNQTYYLYL GLNQAASNDD GKFLLAAKRF RRPTCTDYII SLNCDDVSRG SNTYIGKLRS NFLGTKFTVY
201: DAQPTNPGTQ VTRTRSSRLL SLKQVSPRIP SGNYPVAHIS YELNVLGSRG PRRMQCVMDA IPASAVEPGG TAPTQTELVH SNLDSFPSFS FFRSKSIRAE
301: SLPSGPSSAA QKEGLLVLKN KAPRWHEQLQ CWCLNFNGRV TVASVKNFQL VAAPENGPAG PEHENVILQF GKVGKDVFTM DYQYPISAFQ AFTICLSSFD
401: TKIACE
101: PELSSKLTFP ISLKQPGPRG SLVQCYIMRN RSNQTYYLYL GLNQAASNDD GKFLLAAKRF RRPTCTDYII SLNCDDVSRG SNTYIGKLRS NFLGTKFTVY
201: DAQPTNPGTQ VTRTRSSRLL SLKQVSPRIP SGNYPVAHIS YELNVLGSRG PRRMQCVMDA IPASAVEPGG TAPTQTELVH SNLDSFPSFS FFRSKSIRAE
301: SLPSGPSSAA QKEGLLVLKN KAPRWHEQLQ CWCLNFNGRV TVASVKNFQL VAAPENGPAG PEHENVILQF GKVGKDVFTM DYQYPISAFQ AFTICLSSFD
401: TKIACE
Arabidopsis Description
AtTLP3TLP3 [Source:UniProtKB/TrEMBL;Acc:A0A178VYB2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.