Factsheet for Solyc09g074510.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400029513	Potato	cytosol	98.74	98.74
VIT_01s0010g01060.t01	Wine grape	mitochondrion	11.36	83.33
VIT_07s0104g01290.t01	Wine grape	cytosol	82.58	80.74
AT2G47900.3	Thale cress	cytosol	76.26	74.2
GSMUA_Achr1P11290_001	Banana	cytosol	74.75	72.91
Bra021446.1-P	Field mustard	cytosol	73.99	72.89
CDY27467	Canola	cytosol	72.73	72.54
CDY55525	Canola	cytosol	73.48	72.39
GSMUA_Achr3P17440_001	Banana	cytosol	73.48	72.21
KRH71532	Soybean	cytosol	72.22	71.5
Os03t0351400-01	Rice	cytosol	52.78	70.61
KXG39376	Sorghum	cytosol, plastid	70.71	70.18
Zm00001d029165_P004	Maize	cytosol, plastid	70.96	70.07
TraesCS4D01G164200.1	Wheat	cytosol, plastid	70.2	68.81
TraesCS4B01G166400.1	Wheat	cytosol, plastid	70.2	68.81
TraesCS4A01G140800.1	Wheat	cytosol, plastid	69.7	68.66
Os07t0667000-01	Rice	cytosol	64.14	62.56
TraesCS2D01G122900.1	Wheat	cytosol	57.83	61.23
TraesCS2B01G141800.1	Wheat	cytosol	57.83	60.58
EER97690	Sorghum	cytosol	60.86	60.4
TraesCS2A01G120900.1	Wheat	mitochondrion	57.32	60.37
Solyc01g067680.2.1	Tomato	cytosol	37.88	60.24
Solyc04g071440.2.1	Tomato	mitochondrion	59.34	55.16
Solyc01g104670.2.1	Tomato	cytosol	58.84	54.57
Solyc10g046970.1.1	Tomato	mitochondrion	58.08	53.99
Zm00001d007106_P001	Maize	cytosol	42.42	53.85
Solyc04g071750.2.1	Tomato	cytosol	53.28	52.75
Solyc03g033980.2.1	Tomato	cytosol	54.04	52.71
Solyc02g085130.2.1	Tomato	cytosol	54.29	52.31
Solyc02g062670.2.1	Tomato	cytosol	52.53	50.61
VIT_01s0010g01050.t01	Wine grape	cytosol	15.91	46.67
Solyc07g062390.2.1	Tomato	mitochondrion	44.95	46.11
VIT_00s0426g00050.t01	Wine grape	extracellular	16.67	41.51
Zm00001d029092_P001	Maize	mitochondrion	22.73	26.01
Zm00001d047019_P001	Maize	mitochondrion	22.73	26.01
Solyc03g117730.2.1	Tomato	cytosol	21.46	20.94
Zm00001d039784_P001	Maize	mitochondrion, nucleus, peroxisome, plastid	11.87	17.15

Protein Annotations

MapMan:15.5.21	Gene3D:3.20.90.10	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0005829	GO:GO:0005886	GO:GO:0006950	GO:GO:0008150	GO:GO:0008289	GO:GO:0009536
GO:GO:0009605	GO:GO:0009607	GO:GO:0009620	GO:GO:0009628	GO:GO:0009651	GO:GO:0009987
GO:GO:0016020	GO:GO:0035091	GO:GO:0042542	GO:GO:0071470	InterPro:IPR001810	InterPro:IPR025659
UniProt:K4CV28	PFAM:PF00646	PFAM:PF01167	PRINTS:PR01573	ScanProsite:PS01201	PANTHER:PTHR16517
PANTHER:PTHR16517:SF36	SUPFAM:SSF54518	SUPFAM:SSF81383	EnsemblPlantsGene:Solyc09g074510.2	EnsemblPlants:Solyc09g074510.2.1	InterPro:Tubby-like_C
InterPro:Tubby_C	InterPro:Tubby_C_CS	UniParc:UPI000276B585	:	:	:

Description

No Description!

Coordinates

chr9:+:66307774..66313267

Molecular Weight (calculated)

44428.4 Da

IEP (calculated)

9.527

GRAVY (calculated)

-0.303

Length

396 amino acids

Sequence
(BLAST)

001: MSFKSMIQDM KDEFGSISRK GFRSRSHRVV QDCTVTIDAL RQSCWANMPP ELLRDVLMRI EESDSDWRPR KNVVACAGVC RSWREIMKEI VKTPEVSGKL
101: TFPISLKQPG PRDKLVQCFI RRNRSSQTYH LFLNLNEVAN DDGKFLLAAR KCKRPTYTDY IISLNAEVAS RGSSTYIGKL RSNFLGTKFT VYDAQPSNAG
201: AKVSKCRSTR FVGMKQVSPR IPTGNYPVAH ISYELNVLGA RGPRRMLCIM DAIPASSIEP GGLAPTQTEF VPVNVDSFPS LHFFRSKSTR VDNFSSGPLP
301: SPKDEVLTLK NKAPRWHEQL QCWCLNFNGR VTVASVKNFQ LVASLGDGAG QENENVILQF GKVGEDLFTM DYQYPISAFQ AFAICLSSFD TKIACE

Best Arabidopsis Sequence Match ( AT2G47900.1 )
(BLAST)

001: MSFKSLIQDM RGELGSISRK GFDVRFGYGR SRSQRVVQDT SVPVDAFKQS CWASMPPELL RDVLMRIEQS EDTWPSRKNV VSCAGVCRNW REIVKEIVRV
101: PELSSKLTFP ISLKQPGPRG SLVQCYIMRN RSNQTYYLYL GLNQAASNDD GKFLLAAKRF RRPTCTDYII SLNCDDVSRG SNTYIGKLRS NFLGTKFTVY
201: DAQPTNPGTQ VTRTRSSRLL SLKQVSPRIP SGNYPVAHIS YELNVLGSRG PRRMQCVMDA IPASAVEPGG TAPTQTELVH SNLDSFPSFS FFRSKSIRAE
301: SLPSGPSSAA QKEGLLVLKN KAPRWHEQLQ CWCLNFNGRV TVASVKNFQL VAAPENGPAG PEHENVILQF GKVGKDVFTM DYQYPISAFQ AFTICLSSFD
401: TKIACE

Arabidopsis Description

AtTLP3TLP3 [Source:UniProtKB/TrEMBL;Acc:A0A178VYB2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.