CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH21017	Soybean	mitochondrion	71.95	95.52
KRH21016	Soybean	cytosol	22.08	85.0
VIT_05s0020g01930.t01	Wine grape	cytosol	74.81	82.29
KRH50928	Soybean	cytosol	70.65	75.77
PGSC0003DMT400027634	Potato	cytosol	70.65	70.1
KRH02194	Soybean	cytosol	69.61	68.37
KRH71532	Soybean	cytosol	69.35	66.75
Solyc01g067680.2.1	Tomato	cytosol	40.0	61.85
KRH10476	Soybean	cytosol, mitochondrion	58.44	52.69
KRH28692	Soybean	cytosol	56.36	52.42
KRH76777	Soybean	cytosol	56.36	52.29
KRH43964	Soybean	cytosol, mitochondrion	57.92	52.22
KRH08694	Soybean	mitochondrion	57.14	51.89
KRG91652	Soybean	cytosol, mitochondrion	57.92	51.86
KRH35144	Soybean	cytosol, mitochondrion	57.92	51.86
KRH69894	Soybean	cytosol	55.06	51.21
KRH08239	Soybean	cytosol	55.06	51.21
KRH70303	Soybean	cytosol	56.1	50.94
KRH21960	Soybean	mitochondrion	50.39	50.92
KRH27356	Soybean	mitochondrion	49.61	50.53
KRH15179	Soybean	cytosol	54.29	49.41
KRH05837	Soybean	mitochondrion	55.06	46.7
KRH49321	Soybean	cytosol	21.56	45.36
AT1G61940.2	Thale cress	cytosol	28.05	40.75
KRH25611	Soybean	cytosol	26.75	34.92
KRH23693	Soybean	plastid	21.56	23.31

Protein Annotations

EntrezGene:100815464	MapMan:15.5.21	Gene3D:3.20.90.10	EMBL:ACUP02009195	InterPro:F-box-like_dom_sf	InterPro:F-box_dom
EnsemblPlantsGene:GLYMA_15G098200	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0008289	GO:GO:0035091
UniProt:I1MF73	InterPro:IPR001810	InterPro:IPR025659	EnsemblPlants:KRH11270	ProteinID:KRH11270	ProteinID:KRH11270.1
PFAM:PF00646	PFAM:PF01167	PRINTS:PR01573	ScanProsite:PS01200	ScanProsite:PS01201	PANTHER:PTHR16517
PANTHER:PTHR16517:SF73	SUPFAM:SSF54518	SUPFAM:SSF81383	InterPro:Tubby-like_C	InterPro:Tubby_C	InterPro:Tubby_C_CS
UniParc:UPI000233B175	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr15:-:7632350..7637574

Molecular Weight (calculated)

43334.4 Da

IEP (calculated)

9.424

GRAVY (calculated)

-0.287

Length

385 amino acids

Sequence
(BLAST)

001: MCLIRSMRSQ SQRVVQEQEE AECVGDSMRQ SCWANMPQEL LREVLFRIEA SEDAWPPRKS VVACAGVCRS WRQITIDIVK TPELSSKITF PISVKQPGPR
101: ENLLRCFIKR NRSSQTYYLY LSLTNTLAED GKFLLAARKC RRPTCTDYII SLDADDMSKG SNSYVGKLRS NFLGTKFTIY DGQPPHAGAK IMKSRSTRLV
201: NLKQVSPKVP TGNYPVAHIS YELNVLGSRG PRRMHCVMDS IPAAAIEPGG VAPVQTEFSL NNIDMFPSFP FFRSKSNRVE NSVSGPLVDQ KDGMLVLKNK
301: APRWHEQLQC WCLNFHGRVT IASVKNFQLV ASAENRPAGP EHDKIILQFG KVGKDLFTMD YRFPISAFQA FAICLSSFDT KIACE

Best Arabidopsis Sequence Match ( AT2G47900.3 )
(BLAST)

001: MSFKSLIQDM RGELGSISRK GFDVRFGYGR SRSQRVVQDT SVPVDAFKQS CWASMPPELL RDVLMRIEQS EDTWPSRKNV VSCAGVCRNW REIVKEIVRV
101: PELSSKLTFP ISLKQPGPRG SLVQCYIMRN RSNQTYYLYL GLNQAAASND DGKFLLAAKR FRRPTCTDYI ISLNCDDVSR GSNTYIGKLR SNFLGTKFTV
201: YDAQPTNPGT QVTRTRSSRL LSLKQVSPRI PSGNYPVAHI SYELNVLGSR GPRRMQCVMD AIPASAVEPG GTAPTQTELV HSNLDSFPSF SFFRSKSIRA
301: ESLPSGPSSA AQKEGLLVLK NKAPRWHEQL QCWCLNFNGR VTVASVKNFQ LVAAPENGPA GPEHENVILQ FGKVGKDVFT MDYQYPISAF QAFTICLSSF
401: DTKIACE

Arabidopsis Description

AtTLP3TLP3 [Source:UniProtKB/TrEMBL;Acc:A0A178VYB2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.