Factsheet for TraesCS7D01G167200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G166600.1	Wheat	cytosol	87.5	46.12
HORVU7Hr1G034770.11	Barley	plastid	74.63	29.46
TraesCS5D01G196100.1	Wheat	mitochondrion	29.04	28.73
TraesCS3D01G213400.1	Wheat	cytosol	28.31	28.0
TraesCS1D01G361900.1	Wheat	golgi	29.04	27.43
TraesCS4D01G258900.1	Wheat	cytosol	26.84	26.55
KRH56957	Soybean	cytosol	22.43	24.9
TraesCS4D01G331900.1	Wheat	nucleus	25.0	24.82
PGSC0003DMT400065213	Potato	cytosol	21.69	24.69
AT5G37610.1	Thale cress	endoplasmic reticulum, extracellular	14.71	24.54
VIT_17s0000g05690.t01	Wine grape	cytosol, mitochondrion	23.16	24.42
KRH03426	Soybean	cytosol	21.69	24.08
Solyc03g113210.2.1	Tomato	cytosol	20.59	23.73
KRH63406	Soybean	cytosol	19.49	21.37
TraesCS3D01G247900.1	Wheat	cytosol	25.0	21.12
KRH54504	Soybean	cytosol	18.75	20.56
CDY39954	Canola	extracellular	14.34	18.4
CDY01000	Canola	endoplasmic reticulum, plasma membrane	22.06	16.62

Protein Annotations

Gene3D:2.40.160.10	MapMan:24.4.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005741	GO:GO:0006810	GO:GO:0008150
GO:GO:0008308	GO:GO:0016020	GO:GO:0055085	GO:GO:0098656	InterPro:IPR023614	PFAM:PF01459
ScanProsite:PS00558	PANTHER:PTHR11743	PANTHER:PTHR11743:SF34	InterPro:Porin_Euk	InterPro:Porin_Euk/Tom40	InterPro:Porin_dom_sf
EnsemblPlantsGene:TraesCS7D01G167200	EnsemblPlants:TraesCS7D01G167200.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7D:-:117678121..117679778

Molecular Weight (calculated)

29099.1 Da

IEP (calculated)

9.413

GRAVY (calculated)

-0.010

Length

272 amino acids

Sequence
(BLAST)

001: MRSIIQRETR RIQREVRSSL QMETMLAFFM RSAKRRMVLL SDGSEQIGKA SLGFELSSDT KLIKLTLDDV LRPGLKGLLS IPVSSQSSSK VDLQYRHLGA
101: CITGSSELQG SPIVSFSAVI GTKSIALGAD VSVITKSLDA LGAVDSLETK LLRFPKYTCG LVLSEGDVGA SFTMENADVL TATYHHKLDE TTSIAAKVQR
201: VLSSNDSTLT AGFSHSLDPN TTVKAKLSSD GAVGVLLRYG PKPKCYVAFS AESNSQAPQK DTKFGLCVAL GA

Best Arabidopsis Sequence Match ( AT3G01280.1 )
(BLAST)

001: MVKGPGLYTE IGKKARDLLY KDHNSDQKFS ITTFSPAGVA ITSTGTKKGD LLLGDVAFQS RRKNITTDLK VCTDSTFLIT ATVDEAAPGL RSIFSFKVPD
101: QNSGKVELQY LHEYAGISTS MGLTQNPTVN FSGVIGSNVL AVGTDVSFDT KSGNFTKINA GLSFTKEDLI ASLTVNDKGD LLNASYYHIV NPLFNTAVGA
201: EVSHKLSSKD STITVGTQHS LDPLTSVKAR VNSAGIASAL IQHEWKPKSF FTISGEVDTK SIDKSAKVGL ALALKP

Arabidopsis Description

VDAC1Mitochondrial outer membrane protein porin 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRH5]
SUBAcon: [cytosol,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.