CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38301	Canola	cytosol	14.62	18.67
GSMUA_Achr7P23900_001	Banana	cytosol, unclear	24.06	18.55
Os01t0715500-00	Rice	cytosol, mitochondrion, plasma membrane	17.92	18.18
CDX74294	Canola	cytosol, mitochondrion	23.11	17.75
CDX91952	Canola	mitochondrion	23.11	17.75
GSMUA_Achr7P00060_001	Banana	cytosol	22.64	17.45
GSMUA_Achr3P20500_001	Banana	cytosol	22.64	17.45
CDY66736	Canola	cytosol, mitochondrion, nucleus	22.64	17.39
GSMUA_Achr7P08830_001	Banana	cytosol	22.17	17.09
CDY28690	Canola	cytosol	22.17	17.03
CDY68122	Canola	cytosol	22.17	17.03
GSMUA_Achr6P04840_001	Banana	cytosol	21.7	16.85
HORVU5Hr1G124370.1	Barley	cytosol, mitochondrion, plastid	8.02	16.83
TraesCS3A01G210600.1	Wheat	cytosol, mitochondrion, nucleus, plastid	21.7	16.73
TraesCS3B01G241200.1	Wheat	cytosol, golgi, unclear	21.7	16.73
TraesCS3D01G213400.1	Wheat	cytosol	21.7	16.73
HORVU3Hr1G051010.2	Barley	cytosol, plasma membrane	21.7	16.73
Os01t0588200-01	Rice	mitochondrion, plasma membrane	21.23	16.36
Zm00001d044318_P001	Maize	cytosol, mitochondrion	21.23	16.36
TraesCS5A01G193700.1	Wheat	golgi, unclear	21.23	16.36
EES03185	Sorghum	cytosol	20.75	16.0
TraesCS5D01G196100.1	Wheat	mitochondrion	20.75	16.0
TraesCS5B01G189000.1	Wheat	mitochondrion	20.75	16.0
HORVU3Hr1G013220.1	Barley	cytosol	7.55	15.84
KRH63406	Soybean	cytosol	18.4	15.73
KRH54504	Soybean	cytosol	18.4	15.73
CDY69321	Canola	cytosol	20.28	15.58
EER96631	Sorghum	cytosol	20.28	15.58
CDY59668	Canola	cytosol	20.28	15.58
Zm00001d011135_P001	Maize	cytosol, mitochondrion, nucleus	20.28	15.52
TraesCS1B01G374200.1	Wheat	golgi, unclear	20.75	15.28
Solyc03g113210.2.1	Tomato	cytosol	16.98	15.25
CDY63765	Canola	cytosol	19.81	15.22
Zm00001d020219_P004	Maize	cytosol	19.81	15.22
VIT_17s0000g05690.t01	Wine grape	cytosol, mitochondrion	18.4	15.12
Os05t0536200-01	Rice	mitochondrion	19.81	15.0
TraesCS1D01G361900.1	Wheat	golgi	20.28	14.93
AT5G37610.1	Thale cress	endoplasmic reticulum, extracellular	11.32	14.72
PGSC0003DMT400065213	Potato	cytosol	16.51	14.64
Zm00001d038840_P001	Maize	mitochondrion	18.87	14.49
EES03523	Sorghum	cytosol	18.87	14.44
TraesCS7D01G167200.1	Wheat	mitochondrion	18.4	14.34
KRH03426	Soybean	cytosol	16.51	14.29
EES18574	Sorghum	cytosol	18.4	14.13
KRH56957	Soybean	cytosol	16.04	13.88
Zm00001d011242_P002	Maize	cytosol	19.81	13.86
CDY70638	Canola	cytosol, mitochondrion	16.04	13.6
CDY11866	Canola	cytosol	16.98	13.14
CDX88625	Canola	cytosol	16.98	13.14
HORVU1Hr1G080370.2	Barley	plastid	20.28	13.03
Zm00001d043661_P001	Maize	cytosol	16.98	13.0
CDY02103	Canola	cytosol, mitochondrion, nucleus	15.57	11.96
CDX81312	Canola	cytosol, mitochondrion, nucleus	15.09	11.59
CDY18662	Canola	cytosol	15.09	11.59
TraesCS3B01G276600.1	Wheat	cytosol, plasma membrane, plastid	15.57	11.54
CDY08723	Canola	cytosol, nucleus, plastid	14.62	11.23
CDY36497	Canola	cytosol, nucleus, plastid	14.62	11.23
CDY59666	Canola	cytosol	4.25	11.11
TraesCS3A01G247900.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	16.98	10.88
TraesCS3D01G247900.1	Wheat	cytosol	16.04	10.56
HORVU3Hr1G067610.2	Barley	mitochondrion	16.04	9.8
CDY25906	Canola	plasma membrane	13.68	8.63
CDY01000	Canola	endoplasmic reticulum, plasma membrane	13.68	8.03
TraesCS7A01G166600.1	Wheat	cytosol	18.4	7.56
CDY23028	Canola	mitochondrion	7.55	7.41
Zm00001d005649_P001	Maize	cytosol	3.3	6.48
HORVU7Hr1G034770.11	Barley	plastid	17.45	5.37
CDY43581	Canola	mitochondrion	1.42	4.69

Protein Annotations

Gene3D:2.40.160.10	MapMan:35.2	GO:A0A078HRQ3	UniProt:A0A078HRQ3	EnsemblPlants:CDY39954	ProteinID:CDY39954
ProteinID:CDY39954.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005741	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
EnsemblPlantsGene:GSBRNA2T00068835001	InterPro:IPR023614	PFAM:PF01459	PANTHER:PTHR11743	PANTHER:PTHR11743:SF33	InterPro:Porin_Euk/Tom40
InterPro:Porin_dom_sf	TMHMM:TMhelix	UniParc:UPI0004EE0E8C	:	:	:

Description

BnaC06g40320DBnaC06g40320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HRQ3]

Coordinates

chrLK032461:-:74131..75219

Molecular Weight (calculated)

24535.2 Da

IEP (calculated)

4.969

GRAVY (calculated)

0.159

Length

212 amino acids

Sequence
(BLAST)

001: MICNVDVIPL SIAFWFCYIC NWSLMLCRVW ETFFWRNEFP VDCCFACVNW LFKSTVNQVA FGFLHGLCFV SDFDTTIPNS SKIQFQFMHD YTTFKASIGG
101: LFRDTNIGVS SVIDTKNFSL ELDLLFQTNS INVTRFDADF AYITEEKRTS SIALNEMIQV LMASYHQVID SDTSNGARFR YPFIDHEPIL TFAVEHRLDR
201: HIWLNARADS AG

Best Arabidopsis Sequence Match ( AT5G15090.1 )
(BLAST)

001: MVKGPGLYTE IGKKARDLLY RDYQGDQKFS VTTYSSTGVA ITTTGTNKGS LFLGDVATQV KNNNFTADVK VSTDSSLLTT LTFDEPAPGL KVIVQAKLPD
101: HKSGKAEVQY FHDYAGISTS VGFTATPIVN FSGVVGTNGL SLGTDVAYNT ESGNFKHFNA GFNFTKDDLT ASLILNDKGE KLNASYYQIV SPSTVVGAEI
201: SHNFTTKENA ITVGTQHALD PLTTVKARVN NAGVANALIQ HEWRPKSFFT VSGEVDSKAI DKSAKVGIAL ALKP

Arabidopsis Description

VDAC3Mitochondrial outer membrane protein porin 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SMX3]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.