Factsheet for HORVU3Hr1G013220.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 1
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G124370.1	Barley	cytosol, mitochondrion, plastid	96.04	96.04
TraesCS1D01G361900.1	Wheat	golgi	87.13	30.56
TraesCS1B01G374200.1	Wheat	golgi, unclear	85.15	29.86
HORVU1Hr1G080370.2	Barley	plastid	89.11	27.27
Os05t0536200-01	Rice	mitochondrion	68.32	24.64
EES18574	Sorghum	cytosol	66.34	24.28
Zm00001d038840_P001	Maize	mitochondrion	66.34	24.28
Zm00001d011135_P001	Maize	cytosol, mitochondrion, nucleus	65.35	23.83
GSMUA_Achr7P00060_001	Banana	cytosol	64.36	23.64
GSMUA_Achr7P23900_001	Banana	cytosol, unclear	63.37	23.27
GSMUA_Achr3P20500_001	Banana	cytosol	61.39	22.55
HORVU3Hr1G051010.2	Barley	cytosol, plasma membrane	60.4	22.18
HORVU4Hr1G070150.3	Barley	plasma membrane	46.53	16.97
HORVU3Hr1G067610.2	Barley	mitochondrion	56.44	16.43
AT5G37610.1	Thale cress	endoplasmic reticulum, extracellular	25.74	15.95
VIT_17s0000g05690.t01	Wine grape	cytosol, mitochondrion	38.61	15.12
KRH03426	Soybean	cytosol	35.64	14.69
KRH63406	Soybean	cytosol	35.64	14.52
KRH54504	Soybean	cytosol	34.65	14.11
KRH56957	Soybean	cytosol	33.66	13.88
PGSC0003DMT400065213	Potato	cytosol	30.69	12.97
Solyc03g113210.2.1	Tomato	cytosol	29.7	12.71
CDY39954	Canola	extracellular	15.84	7.55
CDY01000	Canola	endoplasmic reticulum, plasma membrane	21.78	6.09
HORVU7Hr1G034770.11	Barley	plastid	33.66	4.93

Protein Annotations

EnsemblPlants:HORVU3Hr1G013220.1	EnsemblPlantsGene:HORVU3Hr1G013220	Gene3D:2.40.160.10	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005741	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0055085	InterPro:IPR023614	InterPro:Porin_Euk/Tom40	InterPro:Porin_dom_sf	PANTHER:PTHR11743	PANTHER:PTHR11743:SF34
PFAM:PF01459	UniParc:UPI000B4615D6	UniProt:A0A287K4W3	MapMan:24.4.1	:	:

Description

No Description!

Coordinates

chrchr3H:+:28584741..28585824

Molecular Weight (calculated)

11038.2 Da

IEP (calculated)

9.695

GRAVY (calculated)

-0.179

Length

101 amino acids

Sequence
(BLAST)

001: MLNKKGNTLA ASHYHHVQLT AAVGAEIAHN FSSNENTITV GTQHELDPLT TLKGRYNNFG IVSALIQHAW RPMSLITFSI EVDTKAIEKS PKFGLALSPK
101: P

Best Arabidopsis Sequence Match ( AT5G15090.1 )
(BLAST)

001: MVKGPGLYTE IGKKARDLLY RDYQGDQKFS VTTYSSTGVA ITTTGTNKGS LFLGDVATQV KNNNFTADVK VSTDSSLLTT LTFDEPAPGL KVIVQAKLPD
101: HKSGKAEVQY FHDYAGISTS VGFTATPIVN FSGVVGTNGL SLGTDVAYNT ESGNFKHFNA GFNFTKDDLT ASLILNDKGE KLNASYYQIV SPSTVVGAEI
201: SHNFTTKENA ITVGTQHALD PLTTVKARVN NAGVANALIQ HEWRPKSFFT VSGEVDSKAI DKSAKVGIAL ALKP

Arabidopsis Description

VDAC3Mitochondrial outer membrane protein porin 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SMX3]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.