Factsheet for HORVU3Hr1G067610.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G276600.1	Wheat	cytosol, plasma membrane, plastid	64.84	78.67
TraesCS3D01G247900.1	Wheat	cytosol	70.89	76.4
TraesCS3A01G247900.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	71.76	75.23
Os01t0715500-00	Rice	cytosol, mitochondrion, plasma membrane	35.73	59.33
EES03523	Sorghum	cytosol	47.26	59.21
GSMUA_Achr7P23900_001	Banana	cytosol, unclear	46.11	58.18
GSMUA_Achr7P00060_001	Banana	cytosol	44.96	56.73
HORVU3Hr1G013220.1	Barley	cytosol	16.43	56.44
HORVU5Hr1G124370.1	Barley	cytosol, mitochondrion, plastid	16.14	55.45
GSMUA_Achr3P20500_001	Banana	cytosol	43.23	54.55
Zm00001d043661_P001	Maize	cytosol	42.94	53.79
HORVU3Hr1G051010.2	Barley	cytosol, plasma membrane	42.07	53.09
HORVU1Hr1G080370.2	Barley	plastid	48.99	51.52
HORVU4Hr1G070150.3	Barley	plasma membrane	33.43	41.88
KRH63406	Soybean	cytosol	23.63	33.06
KRH03426	Soybean	cytosol	22.77	32.24
VIT_17s0000g05690.t01	Wine grape	cytosol, mitochondrion	23.92	32.17
KRH56957	Soybean	cytosol	22.48	31.84
KRH54504	Soybean	cytosol	22.19	31.05
PGSC0003DMT400065213	Potato	cytosol	19.88	28.87
Solyc03g113210.2.1	Tomato	cytosol	19.6	28.81
AT5G37610.1	Thale cress	endoplasmic reticulum, extracellular	11.53	24.54
CDY01000	Canola	endoplasmic reticulum, plasma membrane	17.58	16.9
CDY39954	Canola	extracellular	9.8	16.04
HORVU7Hr1G034770.11	Barley	plastid	25.65	12.92

Protein Annotations

Gene3D:2.40.160.10	MapMan:24.4.1	UniProt:A0A287LGQ5	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005741	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0055085	EnsemblPlantsGene:HORVU3Hr1G067610	EnsemblPlants:HORVU3Hr1G067610.2	InterPro:IPR023614	PFAM:PF01459	PANTHER:PTHR11743
PANTHER:PTHR11743:SF30	InterPro:Porin_Euk/Tom40	InterPro:Porin_dom_sf	UniParc:UPI000B46DD3A	SEG:seg	:

Description

No Description!

Coordinates

chrchr3H:+:513481508..513485034

Molecular Weight (calculated)

37173.2 Da

IEP (calculated)

8.563

GRAVY (calculated)

-0.213

Length

347 amino acids

Sequence
(BLAST)

001: HHHLCRRPRF RLRRCLVLEP TPSPPMAEPV ITPSKADPVD APSKAPPVDV PPKAAQVDGP SMAGQCGAPP KAATGPGLYS EIGKKTRDLL YRDFTTDQKV
101: TFSTCAANGA AITATSTSKN GATLSEIQTQ LKYRNFKVDV KANSDSQLLI TASEEFRKLA GLKQILTIPF PNPSAGKLEF QYLHDYAGLS LDLVLDSKPL
201: VNVSGLFGNK ALAVGADVAY DSATGDFTKY NFGASFTNGD LFAAVMLNNK GDSISTSYYQ MVSNSQAAAG AEVSHSLSSH ETTATLGVQY FLDPMTTAKV
301: RYDNHGMVSA LIQHELRPKS VLTISSEFDT KAIEKSSKIG LSLLLTP

Best Arabidopsis Sequence Match ( AT3G01280.1 )
(BLAST)

001: MVKGPGLYTE IGKKARDLLY KDHNSDQKFS ITTFSPAGVA ITSTGTKKGD LLLGDVAFQS RRKNITTDLK VCTDSTFLIT ATVDEAAPGL RSIFSFKVPD
101: QNSGKVELQY LHEYAGISTS MGLTQNPTVN FSGVIGSNVL AVGTDVSFDT KSGNFTKINA GLSFTKEDLI ASLTVNDKGD LLNASYYHIV NPLFNTAVGA
201: EVSHKLSSKD STITVGTQHS LDPLTSVKAR VNSAGIASAL IQHEWKPKSF FTISGEVDTK SIDKSAKVGL ALALKP

Arabidopsis Description

VDAC1Mitochondrial outer membrane protein porin 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRH5]
SUBAcon: [cytosol,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.