Factsheet for Os01t0715500-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, cytosol

Predictor Summary:

nucleus 1
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

mitochondrion: 19010998
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 19010998 doi

S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar

Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P23900_001	Banana	cytosol, unclear	66.51	50.55
EES03523	Sorghum	cytosol	66.03	49.82
GSMUA_Achr7P00060_001	Banana	cytosol	65.55	49.82
GSMUA_Achr3P20500_001	Banana	cytosol	65.07	49.45
Os05t0536200-01	Rice	mitochondrion	65.55	48.93
Os01t0588200-01	Rice	mitochondrion, plasma membrane	63.64	48.36
Zm00001d043661_P001	Maize	cytosol	61.24	46.21
TraesCS3B01G276600.1	Wheat	cytosol, plasma membrane, plastid	58.85	43.01
TraesCS3D01G247900.1	Wheat	cytosol	59.33	38.51
TraesCS3A01G247900.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	59.33	37.46
HORVU3Hr1G067610.2	Barley	mitochondrion	59.33	35.73
KRH56957	Soybean	cytosol	37.8	32.24
KRH03426	Soybean	cytosol	37.8	32.24
VIT_17s0000g05690.t01	Wine grape	cytosol, mitochondrion	38.76	31.4
Os03t0137500-01	Rice	mitochondrion	40.19	30.43
Os03t0202200-01	Rice	mitochondrion, nucleus, plasma membrane, plastid	40.19	30.32
Solyc03g113210.2.1	Tomato	cytosol	33.49	29.66
AT5G37610.1	Thale cress	endoplasmic reticulum, extracellular	22.97	29.45
KRH63406	Soybean	cytosol	33.97	28.63
PGSC0003DMT400065213	Potato	cytosol	32.54	28.45
KRH54504	Soybean	cytosol	32.54	27.42
CDY39954	Canola	extracellular	18.18	17.92
CDY01000	Canola	endoplasmic reticulum, plasma membrane	24.88	14.4

Protein Annotations

Gene3D:2.40.160.10	MapMan:24.4.1	UniProt:A0A0N7KDM4	ProteinID:BAS74025.1	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005741
GO:GO:0006810	GO:GO:0006811	GO:GO:0008150	GO:GO:0015288	GO:GO:0016020	GO:GO:0016021
GO:GO:0046930	GO:GO:0055085	InterPro:IPR023614	EnsemblPlantsGene:Os01g0715500	EnsemblPlants:Os01t0715500-00	PFAM:PF01459
PANTHER:PTHR11743	PANTHER:PTHR11743:SF30	InterPro:Porin_Euk/Tom40	InterPro:Porin_dom_sf	UniParc:UPI000393B64C	:

Description

voltage-dependent anion channel 4, voltage-dependent anion-selective channel 4Similar to voltage-dependent anion channel protein2. (Os01t0715500-00)

Coordinates

chr1:-:29770480..29772931

Molecular Weight (calculated)

22238.5 Da

IEP (calculated)

7.180

GRAVY (calculated)

-0.034

Length

209 amino acids

Sequence
(BLAST)

001: KLLPILRQVL TTITTEDLGV SGLKQIVSLP FPYQTAGKAE LQYLHDYAGI SLGVGLTSKP LVNLSGVFGN KSVAVGADVA VDTSTGDFTK YDAGLTINNS
101: DLAADLTLNN KGDSLTASYY HLVNKESGTA AGAELTHSFS TKENTLSFGM QHALDPLTTV KARYNNHGMV SALIQHEWRP KSFLTLSAEV DTKAIDKASK
201: VGLSLVLKP

Best Arabidopsis Sequence Match ( AT3G01280.1 )
(BLAST)

001: MVKGPGLYTE IGKKARDLLY KDHNSDQKFS ITTFSPAGVA ITSTGTKKGD LLLGDVAFQS RRKNITTDLK VCTDSTFLIT ATVDEAAPGL RSIFSFKVPD
101: QNSGKVELQY LHEYAGISTS MGLTQNPTVN FSGVIGSNVL AVGTDVSFDT KSGNFTKINA GLSFTKEDLI ASLTVNDKGD LLNASYYHIV NPLFNTAVGA
201: EVSHKLSSKD STITVGTQHS LDPLTSVKAR VNSAGIASAL IQHEWKPKSF FTISGEVDTK SIDKSAKVGL ALALKP

Arabidopsis Description

VDAC1Mitochondrial outer membrane protein porin 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRH5]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.