Factsheet for Zm00001d043661_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES03523	Sorghum	cytosol	78.34	78.34
Os01t0715500-00	Rice	cytosol, mitochondrion, plasma membrane	46.21	61.24
Zm00001d038840_P001	Maize	mitochondrion	58.48	58.7
GSMUA_Achr7P23900_001	Banana	cytosol, unclear	57.4	57.82
GSMUA_Achr3P20500_001	Banana	cytosol	56.32	56.73
GSMUA_Achr7P00060_001	Banana	cytosol	55.6	56.0
Zm00001d020219_P004	Maize	cytosol	53.79	53.99
Zm00001d044318_P001	Maize	cytosol, mitochondrion	53.07	53.45
TraesCS3B01G276600.1	Wheat	cytosol, plasma membrane, plastid	53.07	51.4
Zm00001d011242_P002	Maize	cytosol	54.51	49.84
Zm00001d005649_P001	Maize	cytosol	19.13	49.07
Zm00001d011135_P001	Maize	cytosol, mitochondrion, nucleus	48.38	48.38
TraesCS3D01G247900.1	Wheat	cytosol	54.15	46.58
TraesCS3A01G247900.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	53.43	44.71
HORVU3Hr1G067610.2	Barley	mitochondrion	53.79	42.94
Zm00001d048149_P002	Maize	mitochondrion	37.55	37.82
Zm00001d028102_P001	Maize	mitochondrion	37.55	37.82
Zm00001d027580_P001	Maize	mitochondrion	37.55	36.75
KRH63406	Soybean	cytosol	31.05	34.68
Zm00001d027578_P001	Maize	peroxisome	31.77	34.51
KRH56957	Soybean	cytosol	29.96	33.88
KRH03426	Soybean	cytosol	29.6	33.47
KRH54504	Soybean	cytosol	29.96	33.47
VIT_17s0000g05690.t01	Wine grape	cytosol, mitochondrion	29.6	31.78
AT5G37610.1	Thale cress	endoplasmic reticulum, extracellular	17.69	30.06
Solyc03g113210.2.1	Tomato	cytosol	24.91	29.24
PGSC0003DMT400065213	Potato	cytosol	24.91	28.87
Zm00001d048362_P002	Maize	endoplasmic reticulum, plasma membrane	36.1	26.95
CDY01000	Canola	endoplasmic reticulum, plasma membrane	22.74	17.45
CDY39954	Canola	extracellular	13.0	16.98

Protein Annotations

EntrezGene:100282730	Gene3D:2.40.160.10	MapMan:24.4.1	UniProt:B6TAU9	EMBL:EU962114	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005741	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0055085	InterPro:IPR023614	ProteinID:ONM38740.1	PFAM:PF01459
PANTHER:PTHR11743	PANTHER:PTHR11743:SF30	InterPro:Porin_Euk/Tom40	InterPro:Porin_dom_sf	UniParc:UPI000182C8B2	EnsemblPlantsGene:Zm00001d043661
EnsemblPlants:Zm00001d043661_P001	EnsemblPlants:Zm00001d043661_T001	:	:	:	:

Description

Outer mitochondrial membrane protein porin

Coordinates

chr3:+:206196920..206199902

Molecular Weight (calculated)

29915.6 Da

IEP (calculated)

9.441

GRAVY (calculated)

-0.157

Length

277 amino acids

Sequence
(BLAST)

001: MGPGLYSDIG RKARDLLTGG FNTGQQLVLI THCSNGTRIA ASSTKSNEFI ISEIQAQLKN KNVTVDVKAN SEANLSTTVT VEELGVLGLK KIITIPYPHP
101: AFGRLEIQYL HDYAGINASS TMNRKPLVNL SAVFGNKAIA AGADVVYDGA TGDFTKYNAG LSFTNADLNA AVTLNNKGDS LTASYYHLVD TEKNTAVGVE
201: VARNFSTKAN RVTFGMRHAL DPTTTVKARY SSNGMASALI QHEWRPKSFC TLSTEVDVNR FDFLQTPKFG LSLVLKP

Best Arabidopsis Sequence Match ( AT3G01280.1 )
(BLAST)

001: MVKGPGLYTE IGKKARDLLY KDHNSDQKFS ITTFSPAGVA ITSTGTKKGD LLLGDVAFQS RRKNITTDLK VCTDSTFLIT ATVDEAAPGL RSIFSFKVPD
101: QNSGKVELQY LHEYAGISTS MGLTQNPTVN FSGVIGSNVL AVGTDVSFDT KSGNFTKINA GLSFTKEDLI ASLTVNDKGD LLNASYYHIV NPLFNTAVGA
201: EVSHKLSSKD STITVGTQHS LDPLTSVKAR VNSAGIASAL IQHEWKPKSF FTISGEVDTK SIDKSAKVGL ALALKP

Arabidopsis Description

VDAC1Mitochondrial outer membrane protein porin 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRH5]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.