Factsheet for Zm00001d048362_P002

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 5
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95548	Sorghum	cytosol, mitochondrion	66.85	89.86
Zm00001d027580_P001	Maize	mitochondrion	66.31	86.93
Zm00001d027578_P001	Maize	peroxisome	58.76	85.49
Os03t0137500-01	Rice	mitochondrion	57.41	77.17
TraesCS5A01G505700.1	Wheat	nucleus	54.45	73.72
TraesCS4B01G336100.1	Wheat	nucleus	54.18	73.36
TraesCS4D01G331900.1	Wheat	nucleus	53.91	72.99
GSMUA_Achr8P14200_001	Banana	extracellular, plasma membrane	46.9	58.19
VIT_11s0052g01030.t01	Wine grape	cytosol	39.62	53.07
KRH02881	Soybean	mitochondrion	38.81	51.99
KRH19015	Soybean	cytosol	38.81	51.99
CDY11866	Canola	cytosol	37.47	50.73
Solyc07g008350.2.1	Tomato	cytosol, plastid	37.74	50.72
CDX88625	Canola	cytosol	37.2	50.37
Bra006817.1-P	Field mustard	cytosol	36.66	49.63
AT5G57490.1	Thale cress	cytosol	36.12	48.91
Zm00001d020219_P004	Maize	cytosol	33.42	44.93
Bra002725.1-P	Field mustard	cytosol	18.6	43.4
Zm00001d044318_P001	Maize	cytosol, mitochondrion	32.08	43.27
Zm00001d005649_P001	Maize	cytosol	12.4	42.59
Zm00001d038840_P001	Maize	mitochondrion	30.19	40.58
Zm00001d028102_P001	Maize	mitochondrion	29.65	40.0
Zm00001d048149_P002	Maize	mitochondrion	29.65	40.0
Zm00001d011242_P002	Maize	cytosol	31.54	38.61
CDY38301	Canola	cytosol	17.25	38.55
Zm00001d011135_P001	Maize	cytosol, mitochondrion, nucleus	28.03	37.55
Zm00001d043661_P001	Maize	cytosol	26.95	36.1
CDY25906	Canola	plasma membrane	31.54	34.82

Protein Annotations

Gene3D:2.40.160.10	MapMan:24.4.1	UniProt:A0A1D6PJM4	ProteinID:AQL09501.1	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005741	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0055085	InterPro:IPR023614	PFAM:PF01459	PANTHER:PTHR11743	PANTHER:PTHR11743:SF27
InterPro:Porin_Euk/Tom40	InterPro:Porin_dom_sf	UniParc:UPI00084373EC	EnsemblPlantsGene:Zm00001d048362	EnsemblPlants:Zm00001d048362_P002	EnsemblPlants:Zm00001d048362_T002
SEG:seg	:	:	:	:	:

Description

Mitochondrial outer membrane protein porin 4

Coordinates

chr9:+:155112607..155116062

Molecular Weight (calculated)

40658.1 Da

IEP (calculated)

9.251

GRAVY (calculated)

0.100

Length

371 amino acids

Sequence
(BLAST)

001: MYARPLLVSF LYANCKADLS YLAICSRQLA MLPLTMLIVY GINMHLLFFS DRLVTGGLLP LYPVMDKTWT YKHKLNLVRA LSLSITEHSI LYRMAVISYL
101: SGIVVKYFIC FDLLYKDYNF DQKFSLSTSS GSGLNLTATG VKINEDFIGD IRTQHKSSRT TIDVTVDSDS KVSTTVTVDE ALTGLKTSFA FKVPDHKSGK
201: LDLQYAHNRF SLNSTIGLTS APLVELAATV GTSELSIGAE VGFDSTSAAV TKYNSGIGYN KSDFSASLLL ADKGETLKAS YVHLFNPTNG ATVAAEVTHK
301: LKTRENYFTV GSSHALDPST LLKMRFSNSG KVGLLCQHEW RPKSLVTLSA EYDLKVVSAP SRIGMAISLK P

Best Arabidopsis Sequence Match ( AT5G57490.1 )
(BLAST)

001: MGSSPAPFAD IGKKAKDLLN KDYIFDHKFT LTMLSATGTE FVATGLKKDD FFFGDISTLY KGQNTIVDLK IDSHSSVSTK VTLKNLLPSA KAVISFKIPD
101: HKSGKLDVQY VHPHATLNSS IGLNPTPLLD LSATIGSQNV CLGGEVSFDT ASSSLTKYNA GIGFNNQGVS AALILEDKGE SLRATYVHTV NPTTSFGAEL
201: IRRFSNYNNS FTVGSSHSVD QFTVVKTRFS NSGKAGMVVQ REWRPKSHIT FSAEYDSKAV TSSPKLGLAL ALKP

Arabidopsis Description

VDAC4Mitochondrial outer membrane protein porin 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKM2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.