Factsheet for Zm00001d011242_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES03185	Sorghum	cytosol	84.49	93.09
Zm00001d044318_P001	Maize	cytosol, mitochondrion	83.17	91.64
Os01t0588200-01	Rice	mitochondrion, plasma membrane	80.86	89.09
TraesCS3B01G241200.1	Wheat	cytosol, golgi, unclear	80.2	88.36
TraesCS3D01G213400.1	Wheat	cytosol	79.87	88.0
TraesCS3A01G210600.1	Wheat	cytosol, mitochondrion, nucleus, plastid	79.54	87.64
HORVU3Hr1G051010.2	Barley	cytosol, plasma membrane	79.21	87.27
GSMUA_Achr7P23900_001	Banana	cytosol, unclear	63.7	70.18
GSMUA_Achr7P00060_001	Banana	cytosol	63.04	69.45
GSMUA_Achr3P20500_001	Banana	cytosol	61.06	67.27
Zm00001d038840_P001	Maize	mitochondrion	60.07	65.94
Zm00001d020219_P004	Maize	cytosol	59.74	65.58
Zm00001d005649_P001	Maize	cytosol	23.1	64.81
Zm00001d011135_P001	Maize	cytosol, mitochondrion, nucleus	50.16	54.87
Zm00001d043661_P001	Maize	cytosol	49.84	54.51
Zm00001d027580_P001	Maize	mitochondrion	39.27	42.05
Zm00001d048149_P002	Maize	mitochondrion	37.95	41.82
Zm00001d027578_P001	Maize	peroxisome	33.99	40.39
Zm00001d028102_P001	Maize	mitochondrion	36.3	40.0
KRH03426	Soybean	cytosol	31.35	38.78
KRH56957	Soybean	cytosol	31.02	38.37
VIT_17s0000g05690.t01	Wine grape	cytosol, mitochondrion	31.35	36.82
PGSC0003DMT400065213	Potato	cytosol	29.04	36.82
Solyc03g113210.2.1	Tomato	cytosol	28.38	36.44
KRH63406	Soybean	cytosol	28.05	34.27
KRH54504	Soybean	cytosol	27.06	33.06
Zm00001d048362_P002	Maize	endoplasmic reticulum, plasma membrane	38.61	31.54
AT5G37610.1	Thale cress	endoplasmic reticulum, extracellular	15.51	28.83
CDY01000	Canola	endoplasmic reticulum, plasma membrane	24.09	20.22
CDY39954	Canola	extracellular	13.86	19.81

Protein Annotations

Gene3D:2.40.160.10	MapMan:24.4.1	UniProt:A0A1D6FYA4	ProteinID:AQK96320.1	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005741
GO:GO:0006810	GO:GO:0008150	GO:GO:0008308	GO:GO:0015698	GO:GO:0016020	GO:GO:0055085
GO:GO:0098656	InterPro:IPR023614	PFAM:PF01459	ScanProsite:PS00558	PANTHER:PTHR11743	PANTHER:PTHR11743:SF33
InterPro:Porin_Euk	InterPro:Porin_Euk/Tom40	InterPro:Porin_dom_sf	UniParc:UPI0008437921	EnsemblPlantsGene:Zm00001d011242	EnsemblPlants:Zm00001d011242_P002
EnsemblPlants:Zm00001d011242_T002	:	:	:	:	:

Description

porin1 porin1

Coordinates

chr8:-:144285793..144288703

Molecular Weight (calculated)

32933.1 Da

IEP (calculated)

8.624

GRAVY (calculated)

-0.180

Length

303 amino acids

Sequence
(BLAST)

001: MAPGLYTDIG KKTRDLLYKD YNTHQKFSLT TCSPNGVVSA PSLLINHHFL LYLSAPPQRT PHFICAITAA GTRKNESIFG ELHTQIKNKK LTVDVKANSE
101: SDLLTTITVD EFGTPGLKSI INLVVPDQRS GKLEFQYLHE YAGVNASVGL NSNPMVNLSG AFGSKALSVG VDVSFDTATS DFTKYNAALS LTSPDLIASL
201: HLNNHGDTLV ASYYHLVKNH SGTAVGAELS HSMSRNESTL IFGSQHSLDP HTTIKTRFNN YGMASALVQH EWRPKSFVTI SGDVDTKAIE KSTKVGLSLV
301: LKH

Best Arabidopsis Sequence Match ( AT3G01280.1 )
(BLAST)

001: MVKGPGLYTE IGKKARDLLY KDHNSDQKFS ITTFSPAGVA ITSTGTKKGD LLLGDVAFQS RRKNITTDLK VCTDSTFLIT ATVDEAAPGL RSIFSFKVPD
101: QNSGKVELQY LHEYAGISTS MGLTQNPTVN FSGVIGSNVL AVGTDVSFDT KSGNFTKINA GLSFTKEDLI ASLTVNDKGD LLNASYYHIV NPLFNTAVGA
201: EVSHKLSSKD STITVGTQHS LDPLTSVKAR VNSAGIASAL IQHEWKPKSF FTISGEVDTK SIDKSAKVGL ALALKP

Arabidopsis Description

VDAC1Mitochondrial outer membrane protein porin 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRH5]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.