Factsheet for Zm00001d048149_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

mitochondrion: 14690504
plastid: 20089766
plastid: 22065420
plastid: 23198870
mitochondrion: 27297264
plasma membrane: 27341663
mitochondrion: 29575040

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 14690504

F Hochholdinger, L Guo, PS Schnable

Department of Agronomy, Iowa State University, Ames, IA 50011, USA.

msms PMID: 20089766 doi

G Friso, W Majeran, M Huang, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 29575040 doi

WQ Wang, Y Wang, Q Zhang, IM Møller, SQ Song

Department of Molecular Biology and Genetics, Aarhus University, DK-4200 Slagelse, Denmark., Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92681	Sorghum	mitochondrion	97.09	97.09
Zm00001d028102_P001	Maize	mitochondrion	96.36	96.36
Os03t0202200-01	Rice	mitochondrion, nucleus, plasma membrane, plastid	85.82	85.2
HORVU4Hr1G070150.3	Barley	plasma membrane	82.55	81.95
TraesCS4D01G258900.1	Wheat	cytosol	81.82	81.82
TraesCS4A01G046000.1	Wheat	plastid	82.18	81.59
TraesCS4B01G259600.1	Wheat	cytosol	82.18	81.59
GSMUA_Achr7P26190_001	Banana	cytosol	71.64	71.64
GSMUA_AchrUn_...	Banana	cytosol	71.64	71.64
Bra031839.1-P	Field mustard	mitochondrion	16.36	70.31
CDY43581	Canola	mitochondrion	16.0	68.75
GSMUA_Achr5P08710_001	Banana	cytosol	67.27	67.27
Solyc02g092440.2.1	Tomato	plastid	66.91	66.67
PGSC0003DMT400055247	Potato	cytosol	66.91	66.67
KRH28358	Soybean	mitochondrion	66.18	65.94
Solyc03g044010.2.1	Tomato	cytosol, nucleus, unclear	65.45	65.69
PGSC0003DMT400023484	Potato	cytosol	65.45	65.69
KRH77123	Soybean	endoplasmic reticulum, mitochondrion	65.82	65.58
VIT_07s0129g00170.t01	Wine grape	cytosol	64.0	63.77
VIT_07s0129g00100.t01	Wine grape	cytosol	25.45	61.4
CDY08723	Canola	cytosol, nucleus, plastid	61.09	60.87
Bra024444.1-P	Field mustard	cytosol, nucleus, plastid	61.09	60.87
CDY36497	Canola	cytosol, nucleus, plastid	60.73	60.51
CDY18662	Canola	cytosol	60.73	60.51
Bra037844.1-P	Field mustard	cytosol, mitochondrion, nucleus	60.73	60.51
CDX81312	Canola	cytosol, mitochondrion, nucleus	60.36	60.14
Bra012915.1-P	Field mustard	cytosol, mitochondrion, nucleus	57.45	57.25
CDY02103	Canola	cytosol, mitochondrion, nucleus	56.73	56.52
AT3G49920.1	Thale cress	cytosol	45.82	55.75
KRH15450	Soybean	cytosol	54.91	54.51
KRH05595	Soybean	plastid	48.73	53.39
AT5G67500.1	Thale cress	cytosol, mitochondrion, nucleus	58.18	52.46
Zm00001d020219_P004	Maize	cytosol	47.27	47.1
Zm00001d038840_P001	Maize	mitochondrion	45.82	45.65
Zm00001d005649_P001	Maize	cytosol	17.82	45.37
Zm00001d027580_P001	Maize	mitochondrion	42.55	41.34
Zm00001d011135_P001	Maize	cytosol, mitochondrion, nucleus	41.45	41.16
Zm00001d044318_P001	Maize	cytosol, mitochondrion	40.73	40.73
VIT_18s0001g09120.t01	Wine grape	mitochondrion	12.36	40.48
Zm00001d011242_P002	Maize	cytosol	41.82	37.95
Zm00001d043661_P001	Maize	cytosol	37.82	37.55
CDY23028	Canola	mitochondrion	29.45	37.5
Zm00001d027578_P001	Maize	peroxisome	34.18	36.86
Zm00001d048362_P002	Maize	endoplasmic reticulum, plasma membrane	40.0	29.65

Protein Annotations

EntrezGene:103639463	Gene3D:2.40.160.10	MapMan:24.4.1	ProteinID:AQL08978.1	EMBL:BT083674	UniProt:C4IYM7
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0005741	GO:GO:0006810	GO:GO:0008150	GO:GO:0008308	GO:GO:0015698
GO:GO:0016020	GO:GO:0055085	GO:GO:0098656	InterPro:IPR023614	PFAM:PF01459	ScanProsite:PS00558
PANTHER:PTHR11743	PANTHER:PTHR11743:SF29	InterPro:Porin_Euk	InterPro:Porin_Euk/Tom40	InterPro:Porin_dom_sf	UniParc:UPI0001A4BC4A
EnsemblPlantsGene:Zm00001d048149	EnsemblPlants:Zm00001d048149_P002	EnsemblPlants:Zm00001d048149_T002	:	:	:

Description

Mitochondrial outer membrane protein porin 2

Coordinates

chr9:+:150906093..150911289

Molecular Weight (calculated)

29184.8 Da

IEP (calculated)

9.659

GRAVY (calculated)

-0.140

Length

275 amino acids

Sequence
(BLAST)

001: MKGPGLFSDI GKKAKDLLSK DYTYDQKLSI FTASASGVGL TSTAVKKGGL YSLDVSSVYK YKNTTVDVKL DTESNISTTL TVLDALPSTK LVTSVKLPDY
101: NSGKVELQYF HENATFATVV GTKPTPVIDL SGTVGAQGVA FGAEAGYDTA TGKFTKYTAA IGVTKPDYHA AFILADKGDT IKVSGVYHLD EKQKASAVAE
201: LTRRLSTNQN TLTVGGLYTV DPQTAVKARL NNTGTLAALL QHELKPKSLL TISGEFDTKA LDRSPKFGLA LALKP

Best Arabidopsis Sequence Match ( AT5G67500.3 )
(BLAST)

001: MSKGPGLFTD IGKKAKDLLT RDYNSDQKFS ISTYSASGVA LTSTALKKGG VHAADVATQY KYKNALFDVK IDTDSSVLTT VTLTEILPST KAIASFKVPD
101: YNSAKLEVQY FHDHATVTAA AALKQNPLID ITATLGSPVI SFGAEAGYDT TSKTFTKYNA GISVTKPDAC LSIILGDKGD SLKASYLHHF DEFKRTAAVG
201: EVYRKFSTNE NTITVGGLYA IDHSTAVKAK LNNHGTLGAL LQHEVLPRSL VTVSSEIDTK ALEKHPRFGL SLALKP

Arabidopsis Description

VDAC2voltage dependent anion channel 2 [Source:TAIR;Acc:AT5G67500]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.