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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • mitochondrion 1
  • cytosol 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra024444.1-P Field mustard cytosol, nucleus, plastid 99.64 99.64
CDY36497 Canola cytosol, nucleus, plastid 98.91 98.91
CDY43581 Canola mitochondrion 22.1 95.31
CDY18662 Canola cytosol 94.2 94.2
CDX81312 Canola cytosol, mitochondrion, nucleus 93.48 93.48
CDY02103 Canola cytosol, mitochondrion, nucleus 81.52 81.52
AT5G67500.1 Thale cress cytosol, mitochondrion, nucleus 89.49 80.98
VIT_07s0129g00170.t01 Wine grape cytosol 72.46 72.46
KRH28358 Soybean mitochondrion 71.38 71.38
KRH77123 Soybean endoplasmic reticulum, mitochondrion 71.01 71.01
VIT_07s0129g00100.t01 Wine grape cytosol 28.62 69.3
Solyc02g092440.2.1 Tomato plastid 68.48 68.48
PGSC0003DMT400023484 Potato cytosol 67.75 68.25
PGSC0003DMT400055247 Potato cytosol 68.12 68.12
Solyc03g044010.2.1 Tomato cytosol, nucleus, unclear 67.39 67.88
GSMUA_AchrUn_... Banana cytosol 64.86 65.09
TraesCS4D01G258900.1 Wheat cytosol 62.68 62.91
TraesCS4A01G046000.1 Wheat plastid 62.68 62.45
TraesCS4B01G259600.1 Wheat cytosol 62.68 62.45
HORVU4Hr1G070150.3 Barley plasma membrane 62.32 62.09
Zm00001d048149_P002 Maize mitochondrion 60.87 61.09
GSMUA_Achr5P08710_001 Banana cytosol 60.87 61.09
EER92681 Sorghum mitochondrion 60.87 61.09
GSMUA_Achr7P26190_001 Banana cytosol 59.78 60.0
Zm00001d028102_P001 Maize mitochondrion 59.78 60.0
Os03t0202200-01 Rice mitochondrion, nucleus, plasma membrane, plastid 57.61 57.4
CDY23028 Canola mitochondrion 44.2 56.48
CDY68122 Canola cytosol 50.0 50.0
CDY28690 Canola cytosol 50.0 50.0
CDY66736 Canola cytosol, mitochondrion, nucleus 49.28 49.28
CDX91952 Canola mitochondrion 48.91 48.91
CDX74294 Canola cytosol, mitochondrion 47.83 47.83
CDY63765 Canola cytosol 46.74 46.74
CDY11866 Canola cytosol 46.01 46.35
CDY69321 Canola cytosol 46.01 46.01
CDY59668 Canola cytosol 45.65 45.65
CDX88625 Canola cytosol 45.29 45.62
CDY59666 Canola cytosol 12.68 43.21
CDY38301 Canola cytosol 19.93 33.13
CDY70638 Canola cytosol, mitochondrion 29.35 32.4
CDY25906 Canola plasma membrane 38.41 31.55
CDY01000 Canola endoplasmic reticulum, plasma membrane 21.38 16.34
CDY39954 Canola extracellular 11.23 14.62
Protein Annotations
Gene3D:2.40.160.10MapMan:24.4.1GO:A0A078FAA9UniProt:A0A078FAA9EnsemblPlants:CDY08723ProteinID:CDY08723
ProteinID:CDY08723.1GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005739
GO:GO:0005741GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00000647001
InterPro:IPR023614PFAM:PF01459PANTHER:PTHR11743PANTHER:PTHR11743:SF29InterPro:Porin_Euk/Tom40InterPro:Porin_dom_sf
UniParc:UPI0004EE166ESEG:seg::::
Description
BnaA06g25010DBnaA06g25010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FAA9]
Coordinates
chrLK031989:+:37828..39604
Molecular Weight (calculated)
29431.9 Da
IEP (calculated)
9.329
GRAVY (calculated)
-0.160
Length
276 amino acids
Sequence
(BLAST)
001: MSKGPGLFSD IGKKAKDLLT RDYTSDHKFS ISTYSASGVA LTSTALKKGG VHAADVTTQY KYKNAVFDVK IDTDSTVLTT VTFTEILPST KAIVSFKVPD
101: NSSGKLEVQY FHDHAAVTAT AALKQNPLID ITATLGTPVI SFGAEAGYDT SSKTFTKYNA GISVTKPDAC ASIILGDKGD SIKASYLHHL DESKRSAAVG
201: EVYRKFSTNE NTITVGGLYA IDHSTSVKAK LNNHGTLGAL LQHEVLPKSL VTVSSEIDTK ALDRHPRFGL SLALKP
Best Arabidopsis Sequence Match ( AT5G67500.3 )
(BLAST)
001: MSKGPGLFTD IGKKAKDLLT RDYNSDQKFS ISTYSASGVA LTSTALKKGG VHAADVATQY KYKNALFDVK IDTDSSVLTT VTLTEILPST KAIASFKVPD
101: YNSAKLEVQY FHDHATVTAA AALKQNPLID ITATLGSPVI SFGAEAGYDT TSKTFTKYNA GISVTKPDAC LSIILGDKGD SLKASYLHHF DEFKRTAAVG
201: EVYRKFSTNE NTITVGGLYA IDHSTAVKAK LNNHGTLGAL LQHEVLPRSL VTVSSEIDTK ALEKHPRFGL SLALKP
Arabidopsis Description
VDAC2voltage dependent anion channel 2 [Source:TAIR;Acc:AT5G67500]
SUBAcon: [mitochondrion,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.