Factsheet for GSMUA_AchrUn_randomP08100_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P08710_001	Banana	cytosol	83.27	83.27
GSMUA_Achr7P26190_001	Banana	cytosol	80.36	80.36
EER92681	Sorghum	mitochondrion	72.0	72.0
Zm00001d048149_P002	Maize	mitochondrion	71.64	71.64
Zm00001d028102_P001	Maize	mitochondrion	70.91	70.91
Os03t0202200-01	Rice	mitochondrion, nucleus, plasma membrane, plastid	71.27	70.76
VIT_07s0129g00170.t01	Wine grape	cytosol	69.82	69.57
Solyc02g092440.2.1	Tomato	plastid	69.09	68.84
TraesCS4D01G258900.1	Wheat	cytosol	68.73	68.73
PGSC0003DMT400055247	Potato	cytosol	68.73	68.48
TraesCS4A01G046000.1	Wheat	plastid	68.36	67.87
TraesCS4B01G259600.1	Wheat	cytosol	68.36	67.87
HORVU4Hr1G070150.3	Barley	plasma membrane	68.0	67.51
Bra031839.1-P	Field mustard	mitochondrion	15.64	67.19
CDY43581	Canola	mitochondrion	15.64	67.19
KRH28358	Soybean	mitochondrion	66.91	66.67
KRH77123	Soybean	endoplasmic reticulum, mitochondrion	66.18	65.94
VIT_07s0129g00100.t01	Wine grape	cytosol	27.27	65.79
Solyc03g044010.2.1	Tomato	cytosol, nucleus, unclear	64.73	64.96
PGSC0003DMT400023484	Potato	cytosol	64.73	64.96
Bra024444.1-P	Field mustard	cytosol, nucleus, plastid	65.09	64.86
CDY18662	Canola	cytosol	65.09	64.86
CDY08723	Canola	cytosol, nucleus, plastid	65.09	64.86
Bra037844.1-P	Field mustard	cytosol, mitochondrion, nucleus	64.73	64.49
CDY36497	Canola	cytosol, nucleus, plastid	64.73	64.49
CDX81312	Canola	cytosol, mitochondrion, nucleus	64.36	64.13
Bra012915.1-P	Field mustard	cytosol, mitochondrion, nucleus	63.64	63.41
CDY02103	Canola	cytosol, mitochondrion, nucleus	62.55	62.32
AT5G67500.1	Thale cress	cytosol, mitochondrion, nucleus	63.27	57.05
AT3G49920.1	Thale cress	cytosol	46.55	56.64
KRH15450	Soybean	cytosol	55.64	55.23
KRH05595	Soybean	plastid	46.91	51.39
GSMUA_Achr7P23900_001	Banana	cytosol, unclear	49.82	49.82
GSMUA_Achr6P04840_001	Banana	cytosol	48.36	48.72
GSMUA_Achr7P00060_001	Banana	cytosol	48.0	48.0
GSMUA_Achr7P08830_001	Banana	cytosol	47.27	47.27
GSMUA_Achr3P20500_001	Banana	cytosol	46.18	46.18
VIT_18s0001g09120.t01	Wine grape	mitochondrion	13.45	44.05
CDY23028	Canola	mitochondrion	33.82	43.06
GSMUA_Achr8P14200_001	Banana	extracellular, plasma membrane	44.73	41.14

Protein Annotations

Gene3D:2.40.160.10	MapMan:24.4.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005741	GO:GO:0006810	GO:GO:0008150
GO:GO:0008308	GO:GO:0015698	GO:GO:0016020	GO:GO:0055085	GO:GO:0098656	EnsemblPlantsGene:GSMUA_AchrUn_randomG08100_001
EnsemblPlants:GSMUA_AchrUn_randomP08100_001	EnsemblPlants:GSMUA_AchrUn_randomT08100_001	InterPro:IPR023614	UniProt:M0U7C1	PFAM:PF01459	ScanProsite:PS00558
PANTHER:PTHR11743	PANTHER:PTHR11743:SF29	InterPro:Porin_Euk	InterPro:Porin_Euk/Tom40	InterPro:Porin_dom_sf	UniParc:UPI0002948662

Description

Mitochondrial outer membrane protein porin of 34 kDa [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG08100_001]

Coordinates

chrchrUn_random:+:34201091..34218407

Molecular Weight (calculated)

29388.3 Da

IEP (calculated)

9.635

GRAVY (calculated)

-0.109

Length

275 amino acids

Sequence
(BLAST)

001: MKGPGLFSDI GRTAKDLLIK DYTCDQKLTI STSSASGVAL TSAAVKKGGL YSFDVGTQYK YKNALINVKI DTDSNISTTL TMAEILPSTK TIASIKLPDY
101: NSGKLEVQYL HHHASVASVV ALKQNPLVEL SGTVGAQGIA FGAEAGFDTA SGTFIKYTAG IALKKPEYNA SIILADKGDT LRASYVYHLD EMQKSSVVAE
201: IVRRFSTNEN TMTVGGQHAL DPQTTVKARL NNSGKLGALL QHELKPKSIL TISGEFDTKA LERTPKFGLA LALKP

Best Arabidopsis Sequence Match ( AT5G67500.3 )
(BLAST)

001: MSKGPGLFTD IGKKAKDLLT RDYNSDQKFS ISTYSASGVA LTSTALKKGG VHAADVATQY KYKNALFDVK IDTDSSVLTT VTLTEILPST KAIASFKVPD
101: YNSAKLEVQY FHDHATVTAA AALKQNPLID ITATLGSPVI SFGAEAGYDT TSKTFTKYNA GISVTKPDAC LSIILGDKGD SLKASYLHHF DEFKRTAAVG
201: EVYRKFSTNE NTITVGGLYA IDHSTAVKAK LNNHGTLGAL LQHEVLPRSL VTVSSEIDTK ALEKHPRFGL SLALKP

Arabidopsis Description

VDAC2voltage dependent anion channel 2 [Source:TAIR;Acc:AT5G67500]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.