Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_07s0129g00100.t01 | Wine grape | cytosol | 30.09 | 57.02 |
| Bra012915.1-P | Field mustard | cytosol, mitochondrion, nucleus | 67.13 | 52.54 |
| CDY02103 | Canola | cytosol, mitochondrion, nucleus | 65.74 | 51.45 |
| CDY08723 | Canola | cytosol, nucleus, plastid | 56.48 | 44.2 |
| CDY18662 | Canola | cytosol | 56.48 | 44.2 |
| CDX81312 | Canola | cytosol, mitochondrion, nucleus | 55.56 | 43.48 |
| CDY36497 | Canola | cytosol, nucleus, plastid | 55.56 | 43.48 |
| VIT_07s0129g00170.t01 | Wine grape | cytosol | 46.3 | 36.23 |
| KRH28358 | Soybean | mitochondrion | 44.91 | 35.14 |
| KRH77123 | Soybean | endoplasmic reticulum, mitochondrion | 43.52 | 34.06 |
| GSMUA_AchrUn_... | Banana | cytosol | 43.06 | 33.82 |
| Solyc03g044010.2.1 | Tomato | cytosol, nucleus, unclear | 42.59 | 33.58 |
| PGSC0003DMT400023484 | Potato | cytosol | 42.59 | 33.58 |
| Solyc02g092440.2.1 | Tomato | plastid | 41.67 | 32.61 |
| PGSC0003DMT400055247 | Potato | cytosol | 41.67 | 32.61 |
| AT3G49920.1 | Thale cress | cytosol | 32.41 | 30.97 |
| GSMUA_Achr7P26190_001 | Banana | cytosol | 38.89 | 30.55 |
| GSMUA_Achr5P08710_001 | Banana | cytosol | 38.89 | 30.55 |
| TraesCS4D01G258900.1 | Wheat | cytosol | 38.43 | 30.18 |
| TraesCS4A01G046000.1 | Wheat | plastid | 38.43 | 29.96 |
| TraesCS4B01G259600.1 | Wheat | cytosol | 38.43 | 29.96 |
| EER92681 | Sorghum | mitochondrion | 37.96 | 29.82 |
| HORVU4Hr1G070150.3 | Barley | plasma membrane | 37.96 | 29.6 |
| Zm00001d048149_P002 | Maize | mitochondrion | 37.5 | 29.45 |
| Zm00001d028102_P001 | Maize | mitochondrion | 36.11 | 28.36 |
| Os03t0202200-01 | Rice | mitochondrion, nucleus, plasma membrane, plastid | 35.65 | 27.8 |
| CDY11866 | Canola | cytosol | 33.8 | 26.64 |
| CDX88625 | Canola | cytosol | 33.33 | 26.28 |
| CDY28690 | Canola | cytosol | 31.94 | 25.0 |
| CDY66736 | Canola | cytosol, mitochondrion, nucleus | 31.48 | 24.64 |
| CDX91952 | Canola | mitochondrion | 31.48 | 24.64 |
| CDX74294 | Canola | cytosol, mitochondrion | 31.02 | 24.28 |
| CDY68122 | Canola | cytosol | 31.02 | 24.28 |
| CDY69321 | Canola | cytosol | 30.56 | 23.91 |
| CDY63765 | Canola | cytosol | 30.56 | 23.91 |
| CDY59668 | Canola | cytosol | 29.63 | 23.19 |
| CDY25906 | Canola | plasma membrane | 27.31 | 17.56 |
| CDY38301 | Canola | cytosol | 12.96 | 16.87 |
| CDY70638 | Canola | cytosol, mitochondrion | 17.59 | 15.2 |
| CDY43581 | Canola | mitochondrion | 3.7 | 12.5 |
| CDY01000 | Canola | endoplasmic reticulum, plasma membrane | 16.2 | 9.7 |
| CDY39954 | Canola | extracellular | 7.41 | 7.55 |
| CDY59666 | Canola | cytosol | 0.46 | 1.23 |
Protein Annotations
| Gene3D:2.40.160.10 | MapMan:35.1 | GO:A0A078GEJ7 | UniProt:A0A078GEJ7 | EnsemblPlants:CDY23028 | ProteinID:CDY23028 |
| ProteinID:CDY23028.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
| GO:GO:0005741 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00021486001 |
| InterPro:IPR023614 | PFAM:PF01459 | PANTHER:PTHR11743 | PANTHER:PTHR11743:SF29 | InterPro:Porin_Euk/Tom40 | InterPro:Porin_dom_sf |
| UniParc:UPI0004EE8E9A | : | : | : | : | : |
Description
BnaC07g31590DBnaC07g31590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GEJ7]
Coordinates
chrLK032139:+:182130..184307
Molecular Weight (calculated)
24081.1 Da
IEP (calculated)
10.189
GRAVY (calculated)
-0.070
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MTGSLNFLPK SKKNKRILAS PGFEPETFSL SIFQWAKTPR CIKFLFFFFG RPNLKKKKRI FLSSCKTDLL TRDYNTDHKF SISTNTLSGV ALTSTVLRKG
101: VVHAADVSTQ YKYRNALFDV KIDTDSNVMT TITITEILPS TKAIASFKVP DYNSSKLEVQ YFHDHATVTA TAALKQNPLV DLTATLGSPT ISFGAEAGYD
201: TTSRLLLLVD CMRLIT
101: VVHAADVSTQ YKYRNALFDV KIDTDSNVMT TITITEILPS TKAIASFKVP DYNSSKLEVQ YFHDHATVTA TAALKQNPLV DLTATLGSPT ISFGAEAGYD
201: TTSRLLLLVD CMRLIT
001: MSKGPGLFTD IGKKAKDLLT RDYNSDQKFS ISTYSASGVA LTSTALKKGG VHAADVATQY KYKNALFDVK IDTDSSVLTT VTLTEILPST KAIASFKVPD
101: YNSAKLEVQY FHDHATVTAA AALKQNPLID ITATLGSPVI SFGAEAGYDT TSKTFTKYNA GISVTKPDAC LSIILGDKGD SLKASYLHHF DEFKRTAAVG
201: EVYRKFSTNE NTITVGGLYA IDHSTAVKAK LNNHGTLGAL LQHEVLPRSL VTVSSEIDTK ALEKHPRNND RRIQIKTVST TSQFGLVDQL LVIEVHSQRR
301: FSQYC
101: YNSAKLEVQY FHDHATVTAA AALKQNPLID ITATLGSPVI SFGAEAGYDT TSKTFTKYNA GISVTKPDAC LSIILGDKGD SLKASYLHHF DEFKRTAAVG
201: EVYRKFSTNE NTITVGGLYA IDHSTAVKAK LNNHGTLGAL LQHEVLPRSL VTVSSEIDTK ALEKHPRNND RRIQIKTVST TSQFGLVDQL LVIEVHSQRR
301: FSQYC
Arabidopsis Description
VDAC2voltage dependent anion channel 2 [Source:TAIR;Acc:AT5G67500]
SUBAcon: [mitochondrion,nucleus,cytosol]
SUBAcon: [mitochondrion,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.