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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX88625 Canola cytosol 99.27 99.27
AT5G57490.1 Thale cress cytosol 89.05 89.05
CDY38301 Canola cytosol 43.07 71.08
VIT_11s0052g01030.t01 Wine grape cytosol 67.52 66.79
Solyc07g008350.2.1 Tomato cytosol, plastid 62.77 62.32
KRH02881 Soybean mitochondrion 62.04 61.37
CDY25906 Canola plasma membrane 75.18 61.31
KRH19015 Soybean cytosol 61.68 61.01
Os03t0137500-01 Rice mitochondrion 56.2 55.8
EER95548 Sorghum cytosol, mitochondrion 53.65 53.26
TraesCS5A01G505700.1 Wheat nucleus 52.92 52.92
TraesCS4D01G331900.1 Wheat nucleus 52.55 52.55
TraesCS4B01G336100.1 Wheat nucleus 52.19 52.19
GSMUA_Achr8P14200_001 Banana extracellular, plasma membrane 56.93 52.17
Zm00001d027580_P001 Maize mitochondrion 52.55 50.88
CDY59666 Canola cytosol 14.6 49.38
CDY43581 Canola mitochondrion 11.31 48.44
CDY59668 Canola cytosol 47.45 47.1
CDY69321 Canola cytosol 47.45 47.1
CDY18662 Canola cytosol 47.08 46.74
CDX81312 Canola cytosol, mitochondrion, nucleus 46.72 46.38
Zm00001d027578_P001 Maize peroxisome 43.07 46.27
CDY63765 Canola cytosol 46.35 46.01
CDY08723 Canola cytosol, nucleus, plastid 46.35 46.01
CDY02103 Canola cytosol, mitochondrion, nucleus 46.35 46.01
CDY36497 Canola cytosol, nucleus, plastid 45.62 45.29
CDY68122 Canola cytosol 44.16 43.84
CDY66736 Canola cytosol, mitochondrion, nucleus 43.8 43.48
CDY28690 Canola cytosol 43.43 43.12
CDX74294 Canola cytosol, mitochondrion 41.97 41.67
CDX91952 Canola mitochondrion 41.97 41.67
Zm00001d048362_P002 Maize endoplasmic reticulum, plasma membrane 50.73 37.47
CDY70638 Canola cytosol, mitochondrion 33.21 36.4
CDY23028 Canola mitochondrion 26.64 33.8
CDY39954 Canola extracellular 13.14 16.98
CDY01000 Canola endoplasmic reticulum, plasma membrane 22.26 16.9
Protein Annotations
Gene3D:2.40.160.10MapMan:24.4.1GO:A0A078FF04UniProt:A0A078FF04EnsemblPlants:CDY11866ProteinID:CDY11866
ProteinID:CDY11866.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005739GO:GO:0005741GO:GO:0006810GO:GO:0008150GO:GO:0008308
GO:GO:0015698GO:GO:0016020GO:GO:0055085GO:GO:0098656EnsemblPlantsGene:GSBRNA2T00060696001InterPro:IPR023614
PFAM:PF01459ScanProsite:PS00558PANTHER:PTHR11743PANTHER:PTHR11743:SF27InterPro:Porin_EukInterPro:Porin_Euk/Tom40
InterPro:Porin_dom_sfUniParc:UPI0004EEAB18SEG:seg:::
Description
BnaC03g12920DBnaC03g12920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FF04]
Coordinates
chrLK032015:+:145981..148637
Molecular Weight (calculated)
29456.0 Da
IEP (calculated)
9.774
GRAVY (calculated)
-0.178
Length
274 amino acids
Sequence
(BLAST)
001: MGSSPAPFPD IGRKAKDLLN KDYIFDQKFT LTMLSATGTE FVATGLQKDD LFFGDISTLY KGQNTIVDLK IDSHSSVSTK VTVKNLMPSA KAVISFKIPD
101: HKSGKLDVQY VHPHATLNSS IGLNPTPLLD LSATIGSQTV SLGGEVGFDT ASSSLTKYNA GISFNKPDFS AALMLEDKGE SLRATYVHTV NPTTSVGAEL
201: IRRFSNHANS FTIGSSYSVD PFTTVKTRLS NNGKAGMVVQ REWRPKSLIT LSAEYDSKAV NSSPRVGLAL ALKP
Best Arabidopsis Sequence Match ( AT5G57490.1 )
(BLAST)
001: MGSSPAPFAD IGKKAKDLLN KDYIFDHKFT LTMLSATGTE FVATGLKKDD FFFGDISTLY KGQNTIVDLK IDSHSSVSTK VTLKNLLPSA KAVISFKIPD
101: HKSGKLDVQY VHPHATLNSS IGLNPTPLLD LSATIGSQNV CLGGEVSFDT ASSSLTKYNA GIGFNNQGVS AALILEDKGE SLRATYVHTV NPTTSFGAEL
201: IRRFSNYNNS FTVGSSHSVD QFTVVKTRFS NSGKAGMVVQ REWRPKSHIT FSAEYDSKAV TSSPKLGLAL ALKP
Arabidopsis Description
VDAC4Mitochondrial outer membrane protein porin 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKM2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.