Factsheet for Zm00001d027578_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d027580_P001	Maize	mitochondrion	89.02	80.21
EER95548	Sorghum	cytosol, mitochondrion	85.49	78.99
Os03t0137500-01	Rice	mitochondrion	74.12	68.48
TraesCS5A01G505700.1	Wheat	nucleus	69.8	64.96
TraesCS4B01G336100.1	Wheat	nucleus	69.41	64.6
TraesCS4D01G331900.1	Wheat	nucleus	69.02	64.23
Zm00001d048362_P002	Maize	endoplasmic reticulum, plasma membrane	85.49	58.76
GSMUA_Achr8P14200_001	Banana	extracellular, plasma membrane	60.39	51.51
KRH02881	Soybean	mitochondrion	51.37	47.29
KRH19015	Soybean	cytosol	50.59	46.57
VIT_11s0052g01030.t01	Wine grape	cytosol	50.2	46.21
Solyc07g008350.2.1	Tomato	cytosol, plastid	47.84	44.2
CDY11866	Canola	cytosol	46.27	43.07
Bra002725.1-P	Field mustard	cytosol	26.67	42.77
CDX88625	Canola	cytosol	45.88	42.7
Bra006817.1-P	Field mustard	cytosol	45.88	42.7
AT5G57490.1	Thale cress	cytosol	45.1	41.97
Zm00001d005649_P001	Maize	cytosol	16.47	38.89
Zm00001d044318_P001	Maize	cytosol, mitochondrion	41.57	38.55
Zm00001d020219_P004	Maize	cytosol	41.18	38.04
CDY38301	Canola	cytosol	24.31	37.35
Zm00001d038840_P001	Maize	mitochondrion	38.04	35.14
Zm00001d048149_P002	Maize	mitochondrion	36.86	34.18
Zm00001d011242_P002	Maize	cytosol	40.39	33.99
Zm00001d028102_P001	Maize	mitochondrion	36.08	33.45
Zm00001d011135_P001	Maize	cytosol, mitochondrion, nucleus	34.9	32.13
Zm00001d043661_P001	Maize	cytosol	34.51	31.77
CDY25906	Canola	plasma membrane	37.25	28.27

Protein Annotations

Gene3D:2.40.160.10	MapMan:24.4.1	UniProt:A0A1D6JN63	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005741	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0055085	InterPro:IPR023614	ProteinID:ONL93479.1	PFAM:PF01459	PANTHER:PTHR11743	PANTHER:PTHR11743:SF27
InterPro:Porin_Euk/Tom40	InterPro:Porin_dom_sf	UniParc:UPI0008456378	EnsemblPlantsGene:Zm00001d027578	EnsemblPlants:Zm00001d027578_P001	EnsemblPlants:Zm00001d027578_T001

Description

outer mitochondrial membrane porin1

Coordinates

chr1:+:8363014..8365720

Molecular Weight (calculated)

27389.9 Da

IEP (calculated)

6.789

GRAVY (calculated)

-0.233

Length

255 amino acids

Sequence
(BLAST)

001: MYFICYDLLY KDYNFDQKFS LSTCSNSGLN LTATGVKINE DFIGDIRTQH KSGRTTVDVI IDSDSKVSTT VTVDEALTGL KTSFAFKVPD HKSGKLDLQY
101: AHNRFSMNST IGLTSTPLVE LAATVGTSEL AIGAEFGFDS TSAAVTKYNS GVGYNKSDFS VSLLLADKGE TLKASYVHLF NPTNGATVAA EVTHKLKTKE
201: NYFTLGSSHA LDPSTLLKTR FSNSGKAASE NDNCASADSR GFTLIGSSNE SKAKI

Best Arabidopsis Sequence Match ( AT3G01280.1 )
(BLAST)

001: MVKGPGLYTE IGKKARDLLY KDHNSDQKFS ITTFSPAGVA ITSTGTKKGD LLLGDVAFQS RRKNITTDLK VCTDSTFLIT ATVDEAAPGL RSIFSFKVPD
101: QNSGKVELQY LHEYAGISTS MGLTQNPTVN FSGVIGSNVL AVGTDVSFDT KSGNFTKINA GLSFTKEDLI ASLTVNDKGD LLNASYYHIV NPLFNTAVGA
201: EVSHKLSSKD STITVGTQHS LDPLTSVKAR VNSAGIASAL IQHEWKPKSF FTISGEVDTK SIDKSAKVGL ALALKP

Arabidopsis Description

VDAC1Mitochondrial outer membrane protein porin 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRH5]
SUBAcon: [cytosol,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.