Factsheet for Zm00001d005649_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER96631	Sorghum	cytosol	92.59	36.23
Zm00001d020219_P004	Maize	cytosol	90.74	35.51
TraesCS5D01G196100.1	Wheat	mitochondrion	80.56	31.64
TraesCS5B01G189000.1	Wheat	mitochondrion	80.56	31.64
TraesCS5A01G193700.1	Wheat	golgi, unclear	80.56	31.64
GSMUA_Achr7P23900_001	Banana	cytosol, unclear	75.93	29.82
GSMUA_Achr3P20500_001	Banana	cytosol	73.15	28.73
GSMUA_Achr7P00060_001	Banana	cytosol	73.15	28.73
Zm00001d038840_P001	Maize	mitochondrion	64.81	25.36
Zm00001d044318_P001	Maize	cytosol, mitochondrion	62.04	24.36
Zm00001d011242_P002	Maize	cytosol	64.81	23.1
Zm00001d043661_P001	Maize	cytosol	49.07	19.13
Zm00001d048149_P002	Maize	mitochondrion	45.37	17.82
Zm00001d028102_P001	Maize	mitochondrion	44.44	17.45
Zm00001d011135_P001	Maize	cytosol, mitochondrion, nucleus	44.44	17.33
Zm00001d027578_P001	Maize	peroxisome	38.89	16.47
Zm00001d027580_P001	Maize	mitochondrion	42.59	16.25
Zm00001d048362_P002	Maize	endoplasmic reticulum, plasma membrane	42.59	12.4
PGSC0003DMT400065213	Potato	cytosol	26.85	12.13
KRH56957	Soybean	cytosol	24.07	10.61
Solyc03g113210.2.1	Tomato	cytosol	23.15	10.59
KRH63406	Soybean	cytosol	24.07	10.48
KRH54504	Soybean	cytosol	23.15	10.08
VIT_17s0000g05690.t01	Wine grape	cytosol, mitochondrion	24.07	10.08
KRH03426	Soybean	cytosol	22.22	9.8
CDY01000	Canola	endoplasmic reticulum, plasma membrane	18.52	5.54
CDY39954	Canola	extracellular	6.48	3.3
AT5G37610.1	Thale cress	endoplasmic reticulum, extracellular	0.93	0.61

Protein Annotations

Gene3D:2.40.160.10	MapMan:35.1	UniProt:A0A1D6EPA8	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005741	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0055085	InterPro:IPR023614	ProteinID:ONM21609.1	PFAM:PF01459	PANTHER:PTHR11743	PANTHER:PTHR11743:SF33
InterPro:Porin_Euk/Tom40	InterPro:Porin_dom_sf	UniParc:UPI00084373A8	EnsemblPlantsGene:Zm00001d005649	EnsemblPlants:Zm00001d005649_P001	EnsemblPlants:Zm00001d005649_T001

Description

voltage-dependent anion channel protein1a voltage-dependent anion channel protein1a

Coordinates

chr2:+:181908131..181911665

Molecular Weight (calculated)

11780.2 Da

IEP (calculated)

9.420

GRAVY (calculated)

-0.193

Length

108 amino acids

Sequence
(BLAST)

001: MVGPGLYTEI GKKTRDLLYK DYQTDHKFTL TTYTSNGVAV TASSTKKADL ILGEIQSQIK NKNMTIDVKA NSESNIITTI TVDEIATPGL KTILSFAVPD
101: QRSGKVII

Best Arabidopsis Sequence Match ( AT3G01280.1 )
(BLAST)

001: MVKGPGLYTE IGKKARDLLY KDHNSDQKFS ITTFSPAGVA ITSTGTKKGD LLLGDVAFQS RRKNITTDLK VCTDSTFLIT ATVDEAAPGL RSIFSFKVPD
101: QNSGKVELQY LHEYAGISTS MGLTQNPTVN FSGVIGSNVL AVGTDVSFDT KSGNFTKINA GLSFTKEDLI ASLTVNDKGD LLNASYYHIV NPLFNTAVGA
201: EVSHKLSSKD STITVGTQHS LDPLTSVKAR VNSAGIASAL IQHEWKPKSF FTISGEVDTK SIDKSAKVGL ALALKP

Arabidopsis Description

VDAC1Mitochondrial outer membrane protein porin 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRH5]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.