Factsheet for GSMUA_Achr3P20500_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P23900_001	Banana	cytosol, unclear	87.27	87.27
GSMUA_Achr7P00060_001	Banana	cytosol	85.09	85.09
TraesCS5D01G196100.1	Wheat	mitochondrion	73.82	73.82
TraesCS5B01G189000.1	Wheat	mitochondrion	73.82	73.82
TraesCS5A01G193700.1	Wheat	golgi, unclear	73.45	73.45
Zm00001d005649_P001	Maize	cytosol	28.73	73.15
GSMUA_Achr7P08830_001	Banana	cytosol	72.36	72.36
EER96631	Sorghum	cytosol	72.36	72.1
GSMUA_Achr6P04840_001	Banana	cytosol	70.91	71.43
Os01t0588200-01	Rice	mitochondrion, plasma membrane	69.45	69.45
TraesCS3A01G210600.1	Wheat	cytosol, mitochondrion, nucleus, plastid	68.36	68.36
TraesCS3D01G213400.1	Wheat	cytosol	68.36	68.36
TraesCS3B01G241200.1	Wheat	cytosol, golgi, unclear	68.36	68.36
Zm00001d020219_P004	Maize	cytosol	68.36	68.12
EES03185	Sorghum	cytosol	67.27	67.27
HORVU3Hr1G051010.2	Barley	cytosol, plasma membrane	67.27	67.27
Zm00001d044318_P001	Maize	cytosol, mitochondrion	66.18	66.18
Zm00001d038840_P001	Maize	mitochondrion	65.45	65.22
Os01t0715500-00	Rice	cytosol, mitochondrion, plasma membrane	49.45	65.07
EES18574	Sorghum	cytosol	65.09	64.86
Os05t0536200-01	Rice	mitochondrion	65.09	63.93
EES03523	Sorghum	cytosol	62.91	62.45
HORVU5Hr1G124370.1	Barley	cytosol, mitochondrion, plastid	22.91	62.38
HORVU3Hr1G013220.1	Barley	cytosol	22.55	61.39
Zm00001d011242_P002	Maize	cytosol	67.27	61.06
TraesCS1D01G361900.1	Wheat	golgi	60.73	57.99
Zm00001d011135_P001	Maize	cytosol, mitochondrion, nucleus	57.82	57.4
TraesCS1B01G374200.1	Wheat	golgi, unclear	60.0	57.29
Zm00001d043661_P001	Maize	cytosol	56.73	56.32
TraesCS3B01G276600.1	Wheat	cytosol, plasma membrane, plastid	54.91	52.8
HORVU1Hr1G080370.2	Barley	plastid	60.73	50.61
TraesCS3D01G247900.1	Wheat	cytosol	55.27	47.2
GSMUA_AchrUn_...	Banana	cytosol	46.18	46.18
GSMUA_Achr5P08710_001	Banana	cytosol	45.82	45.82
GSMUA_Achr7P26190_001	Banana	cytosol	45.82	45.82
TraesCS3A01G247900.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	53.45	44.41
HORVU3Hr1G067610.2	Barley	mitochondrion	54.55	43.23
VIT_17s0000g05690.t01	Wine grape	cytosol, mitochondrion	39.27	41.86
KRH56957	Soybean	cytosol	36.73	41.22
KRH03426	Soybean	cytosol	36.36	40.82
GSMUA_Achr8P14200_001	Banana	extracellular, plasma membrane	42.18	38.8
KRH63406	Soybean	cytosol	33.45	37.1
KRH54504	Soybean	cytosol	33.45	37.1
Solyc03g113210.2.1	Tomato	cytosol	31.27	36.44
PGSC0003DMT400065213	Potato	cytosol	31.27	35.98
AT5G37610.1	Thale cress	endoplasmic reticulum, extracellular	16.36	27.61
CDY39954	Canola	extracellular	17.45	22.64
CDY01000	Canola	endoplasmic reticulum, plasma membrane	24.36	18.56

Protein Annotations

Gene3D:2.40.160.10	MapMan:24.4.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005741	GO:GO:0006810	GO:GO:0008150
GO:GO:0008308	GO:GO:0015698	GO:GO:0016020	GO:GO:0055085	GO:GO:0098656	EnsemblPlantsGene:GSMUA_Achr3G20500_001
EnsemblPlants:GSMUA_Achr3P20500_001	EnsemblPlants:GSMUA_Achr3T20500_001	InterPro:IPR023614	UniProt:M0SGB6	PFAM:PF01459	PANTHER:PTHR11743
PANTHER:PTHR11743:SF33	InterPro:Porin_Euk/Tom40	InterPro:Porin_dom_sf	UniParc:UPI000294BD19	:	:

Description

Mitochondrial outer membrane protein porin [Source:GMGC_GENE;Acc:GSMUA_Achr3G20500_001]

Coordinates

chr3:-:21632867..21638164

Molecular Weight (calculated)

29714.2 Da

IEP (calculated)

9.405

GRAVY (calculated)

-0.183

Length

275 amino acids

Sequence
(BLAST)

001: MGPGLYFEIG RKARELLYRD YQTDHKVTVT TCTSNGVEIT ASGTRKNDLI FGEIQSHIKN KNVTFDVKTN SDSNVTTTIT IDELASPGLK TIFSFVVPDQ
101: RSGKVEIQYL HDYTGINASI GLTANPVVNL SGAVGSKTLS VGADVAFDTT TGKFIKYNAG LSITNADLIA ALTLNNRGDS LTASYYHLVK SLSRTAVGAE
201: LTHSFSSNEN TLTFGTQHAL DRLTTVKGRI NSYGKASALI QHEWKPKSFL TISGEIDTKA IEKSSKVGLS LVLRP

Best Arabidopsis Sequence Match ( AT3G01280.1 )
(BLAST)

001: MVKGPGLYTE IGKKARDLLY KDHNSDQKFS ITTFSPAGVA ITSTGTKKGD LLLGDVAFQS RRKNITTDLK VCTDSTFLIT ATVDEAAPGL RSIFSFKVPD
101: QNSGKVELQY LHEYAGISTS MGLTQNPTVN FSGVIGSNVL AVGTDVSFDT KSGNFTKINA GLSFTKEDLI ASLTVNDKGD LLNASYYHIV NPLFNTAVGA
201: EVSHKLSSKD STITVGTQHS LDPLTSVKAR VNSAGIASAL IQHEWKPKSF FTISGEVDTK SIDKSAKVGL ALALKP

Arabidopsis Description

VDAC1Mitochondrial outer membrane protein porin 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRH5]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.