Factsheet for HORVU5Hr1G124370.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid, mitochondrion

Predictor Summary:

mitochondrion 2
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G013220.1	Barley	cytosol	96.04	96.04
TraesCS1D01G361900.1	Wheat	golgi	89.11	31.25
TraesCS1B01G374200.1	Wheat	golgi, unclear	87.13	30.56
HORVU1Hr1G080370.2	Barley	plastid	91.09	27.88
Os05t0536200-01	Rice	mitochondrion	69.31	25.0
Zm00001d038840_P001	Maize	mitochondrion	68.32	25.0
EES18574	Sorghum	cytosol	67.33	24.64
Zm00001d011135_P001	Maize	cytosol, mitochondrion, nucleus	66.34	24.19
GSMUA_Achr7P00060_001	Banana	cytosol	65.35	24.0
GSMUA_Achr7P23900_001	Banana	cytosol, unclear	64.36	23.64
GSMUA_Achr3P20500_001	Banana	cytosol	62.38	22.91
HORVU3Hr1G051010.2	Barley	cytosol, plasma membrane	59.41	21.82
HORVU4Hr1G070150.3	Barley	plasma membrane	44.55	16.25
HORVU3Hr1G067610.2	Barley	mitochondrion	55.45	16.14
AT5G37610.1	Thale cress	endoplasmic reticulum, extracellular	25.74	15.95
VIT_17s0000g05690.t01	Wine grape	cytosol, mitochondrion	38.61	15.12
KRH03426	Soybean	cytosol	36.63	15.1
KRH63406	Soybean	cytosol	35.64	14.52
KRH56957	Soybean	cytosol	34.65	14.29
KRH54504	Soybean	cytosol	34.65	14.11
PGSC0003DMT400065213	Potato	cytosol	30.69	12.97
Solyc03g113210.2.1	Tomato	cytosol	29.7	12.71
CDY39954	Canola	extracellular	16.83	8.02
CDY01000	Canola	endoplasmic reticulum, plasma membrane	21.78	6.09
HORVU7Hr1G034770.11	Barley	plastid	33.66	4.93

Protein Annotations

Gene3D:2.40.160.10	MapMan:24.4.1	UniProt:A0A287T1L8	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005741	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0055085	EnsemblPlantsGene:HORVU5Hr1G124370	EnsemblPlants:HORVU5Hr1G124370.1	InterPro:IPR023614	PFAM:PF01459	PANTHER:PTHR11743
PANTHER:PTHR11743:SF34	InterPro:Porin_Euk/Tom40	InterPro:Porin_dom_sf	UniParc:UPI000B47C73F	:	:

Description

No Description!

Coordinates

chrchr5H:-:666009189..666010272

Molecular Weight (calculated)

11101.2 Da

IEP (calculated)

9.043

GRAVY (calculated)

-0.259

Length

101 amino acids

Sequence
(BLAST)

001: MLNKKGNTLA ASHYHHVQLT TAVGAEIAHS FSSNENTITV GTQHELDPLT TLKGRYNNFG IVSALIQHAW RPMSLITFST EVDTKAIEKS PKFELALSPK
101: P

Best Arabidopsis Sequence Match ( AT5G15090.1 )
(BLAST)

001: MVKGPGLYTE IGKKARDLLY RDYQGDQKFS VTTYSSTGVA ITTTGTNKGS LFLGDVATQV KNNNFTADVK VSTDSSLLTT LTFDEPAPGL KVIVQAKLPD
101: HKSGKAEVQY FHDYAGISTS VGFTATPIVN FSGVVGTNGL SLGTDVAYNT ESGNFKHFNA GFNFTKDDLT ASLILNDKGE KLNASYYQIV SPSTVVGAEI
201: SHNFTTKENA ITVGTQHALD PLTTVKARVN NAGVANALIQ HEWRPKSFFT VSGEVDSKAI DKSAKVGIAL ALKP

Arabidopsis Description

VDAC3Mitochondrial outer membrane protein porin 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SMX3]
SUBAcon: [cytosol,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.