CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63406	Soybean	cytosol	93.55	93.55
KRH03426	Soybean	cytosol	56.05	56.73
KRH56957	Soybean	cytosol	56.05	56.73
VIT_17s0000g05690.t01	Wine grape	cytosol, mitochondrion	38.31	36.82
KRH01127	Soybean	mitochondrion	39.52	35.51
KRH40133	Soybean	mitochondrion	39.11	35.14
KRH18503	Soybean	mitochondrion	38.71	34.78
HORVU3Hr1G013220.1	Barley	cytosol	14.11	34.65
HORVU5Hr1G124370.1	Barley	cytosol, mitochondrion, plastid	14.11	34.65
KRG93501	Soybean	endoplasmic reticulum, mitochondrion	37.9	34.06
KRG99160	Soybean	mitochondrion	37.5	33.7
PGSC0003DMT400065213	Potato	cytosol	32.26	33.47
GSMUA_Achr3P20500_001	Banana	cytosol	37.1	33.45
GSMUA_Achr7P00060_001	Banana	cytosol	37.1	33.45
GSMUA_Achr7P23900_001	Banana	cytosol, unclear	37.1	33.45
KRH45848	Soybean	mitochondrion	37.1	33.33
EES03523	Sorghum	cytosol	37.1	33.21
GSMUA_Achr7P08830_001	Banana	cytosol	36.69	33.09
Solyc03g113210.2.1	Tomato	cytosol	31.45	33.05
Os01t0715500-00	Rice	cytosol, mitochondrion, plasma membrane	27.42	32.54
Zm00001d038840_P001	Maize	mitochondrion	35.89	32.25
EES18574	Sorghum	cytosol	35.89	32.25
TraesCS5A01G193700.1	Wheat	golgi, unclear	35.48	32.0
EES03185	Sorghum	cytosol	35.48	32.0
EER96631	Sorghum	cytosol	35.48	31.88
TraesCS5B01G189000.1	Wheat	mitochondrion	35.08	31.64
TraesCS5D01G196100.1	Wheat	mitochondrion	35.08	31.64
Zm00001d044318_P001	Maize	cytosol, mitochondrion	35.08	31.64
Zm00001d020219_P004	Maize	cytosol	35.08	31.52
GSMUA_Achr6P04840_001	Banana	cytosol	34.68	31.5
Zm00001d011135_P001	Maize	cytosol, mitochondrion, nucleus	34.27	30.69
TraesCS3D01G213400.1	Wheat	cytosol	33.47	30.18
TraesCS3B01G241200.1	Wheat	cytosol, golgi, unclear	33.47	30.18
TraesCS3A01G210600.1	Wheat	cytosol, mitochondrion, nucleus, plastid	33.47	30.18
Os05t0536200-01	Rice	mitochondrion	33.87	30.0
Zm00001d043661_P001	Maize	cytosol	33.47	29.96
TraesCS1B01G374200.1	Wheat	golgi, unclear	34.68	29.86
Os01t0588200-01	Rice	mitochondrion, plasma membrane	33.06	29.82
TraesCS1D01G361900.1	Wheat	golgi	34.27	29.51
HORVU3Hr1G051010.2	Barley	cytosol, plasma membrane	32.66	29.45
KRH77123	Soybean	endoplasmic reticulum, mitochondrion	32.26	28.99
KRH28358	Soybean	mitochondrion	32.26	28.99
TraesCS3B01G276600.1	Wheat	cytosol, plasma membrane, plastid	31.45	27.27
Zm00001d011242_P002	Maize	cytosol	33.06	27.06
AT5G37610.1	Thale cress	endoplasmic reticulum, extracellular	17.34	26.38
HORVU1Hr1G080370.2	Barley	plastid	35.08	26.36
KRH02881	Soybean	mitochondrion	29.03	25.99
KRH19015	Soybean	cytosol	29.03	25.99
KRH15450	Soybean	cytosol	27.42	24.55
TraesCS3D01G247900.1	Wheat	cytosol	31.85	24.53
TraesCS3A01G247900.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	31.45	23.57
Zm00001d005649_P001	Maize	cytosol	10.08	23.15
HORVU3Hr1G067610.2	Barley	mitochondrion	31.05	22.19
KRH05595	Soybean	plastid	21.77	21.51
TraesCS7D01G167200.1	Wheat	mitochondrion	20.56	18.75
CDY39954	Canola	extracellular	15.73	18.4
CDY01000	Canola	endoplasmic reticulum, plasma membrane	21.37	14.68
TraesCS7A01G166600.1	Wheat	cytosol	24.6	11.82
HORVU7Hr1G034770.11	Barley	plastid	25.4	9.14

Protein Annotations

EntrezGene:100784432	Gene3D:2.40.160.10	MapMan:24.4.1	EMBL:ACUP02003536	EnsemblPlantsGene:GLYMA_06G190400	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005741	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0055085	InterPro:IPR023614	UniProt:K7KVW5	EnsemblPlants:KRH54504
ProteinID:KRH54504	ProteinID:KRH54504.1	PFAM:PF01459	PANTHER:PTHR11743	PANTHER:PTHR11743:SF35	InterPro:Porin_Euk/Tom40
InterPro:Porin_dom_sf	UniParc:UPI0002339458	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:16712250..16714394

Molecular Weight (calculated)

26784.9 Da

IEP (calculated)

8.867

GRAVY (calculated)

-0.160

Length

248 amino acids

Sequence
(BLAST)

001: MSQGPGLYFD IGKKARDVLH KGYAQQPPIH FNYRFLNWNL DLSCQEELVH GLRGLFTCNI PDSGKLEIQH FSRFSGFSAS IGLSGEAEKG YNPVANISGH
101: IGTRILTLGA NLACDLSGSS SARTTNNLNA GLSLNSPYLV AAATLHDNFQ TLKGSCYFEV NPLTKTAIAA EVKYDLADDE TTGVTVGAQH ALFSWTLLKA
201: RLNNNGKVGG LIQQKFGTKF SITVAGEINL NEKAKEKFPK VGVSMALK

Best Arabidopsis Sequence Match ( AT3G01280.1 )
(BLAST)

001: MVKGPGLYTE IGKKARDLLY KDHNSDQKFS ITTFSPAGVA ITSTGTKKGD LLLGDVAFQS RRKNITTDLK VCTDSTFLIT ATVDEAAPGL RSIFSFKVPD
101: QNSGKVELQY LHEYAGISTS MGLTQNPTVN FSGVIGSNVL AVGTDVSFDT KSGNFTKINA GLSFTKEDLI ASLTVNDKGD LLNASYYHIV NPLFNTAVGA
201: EVSHKLSSKD STITVGTQHS LDPLTSVKAR VNSAGIASAL IQHEWKPKSF FTISGEVDTK SIDKSAKVGL ALALKP

Arabidopsis Description

VDAC1Mitochondrial outer membrane protein porin 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRH5]
SUBAcon: [cytosol,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.