Factsheet for TraesCS7A01G166600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G167200.1	Wheat	mitochondrion	46.12	87.5
HORVU7Hr1G034770.11	Barley	plastid	77.33	57.91
TraesCS5A01G193700.1	Wheat	golgi, unclear	18.41	34.55
TraesCS3A01G210600.1	Wheat	cytosol, mitochondrion, nucleus, plastid	17.44	32.73
TraesCS4A01G046000.1	Wheat	plastid	16.86	31.41
TraesCS5A01G505700.1	Wheat	nucleus	15.5	29.2
VIT_17s0000g05690.t01	Wine grape	cytosol, mitochondrion	14.34	28.68
KRH56957	Soybean	cytosol	13.57	28.57
PGSC0003DMT400065213	Potato	cytosol	13.18	28.45
Solyc03g113210.2.1	Tomato	cytosol	12.98	28.39
KRH03426	Soybean	cytosol	13.18	27.76
TraesCS3A01G247900.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	17.25	26.89
KRH63406	Soybean	cytosol	12.4	25.81
KRH54504	Soybean	cytosol	11.82	24.6
AT5G37610.1	Thale cress	endoplasmic reticulum, extracellular	7.75	24.54
CDY01000	Canola	endoplasmic reticulum, plasma membrane	13.76	19.67
CDY39954	Canola	extracellular	7.56	18.4

Protein Annotations

EnsemblPlants:TraesCS7A01G166600.1	EnsemblPlantsGene:TraesCS7A01G166600	Gene3D:2.40.160.10	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005741	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0055085	InterPro:IPR023614	InterPro:Porin_Euk/Tom40	InterPro:Porin_dom_sf	PANTHER:PTHR11743	PANTHER:PTHR11743:SF34
PFAM:PF01459	SEG:seg	MapMan:24.4.1	:	:	:

Description

No Description!

Coordinates

chr7A:-:122040369..122043386

Molecular Weight (calculated)

53802.6 Da

IEP (calculated)

5.685

GRAVY (calculated)

-0.116

Length

516 amino acids

Sequence
(BLAST)

001: MDPEDMVDRD RSEIESSRAD ELNGLALLFI LGASGGGAVG RVLGAAWRAR LPAVVPATRA VRSAARAAKT PTTPPAAPRA GSAAPSAGAR PATTGAAPAS
101: APPAGSATPP AVPFLDPVKA VNDAISKVET PVFFPSRIAN TYIEIVKLLS HGGWSVYLLD KYAEKGCSDV CPFTGNGEFS PVPVQKPAVA VQLPAEVDEK
201: HHSVGDKGDA EGVAVQVPDK VNEKHHSEGD KEDSEGGEKQ PADGDYACFF HEIGKKAYDL LYQDYNTGLK MVSDCKVLDT AVLLSDGSEQ VGKASLGFEL
301: SSDTKLIKLT LDDVLRPGLK GLLSIPVSSQ SSSKVDLQYR HLGACITGSS ELQGSPIVSF SAMIGTKSIA LGADVSVITK SLDALGAVGS LETQLLRFPK
401: YTCGLVLSEG DVGASFTMEN ADVLTATYHQ KLDETTSIAA KVQRVLSSND STLTAGFSHS LDPNTTVKAK LGSDGAVSVL LRYGPKPKRY VAFSAESNSQ
501: APQKDTKFGL CVALGA

Best Arabidopsis Sequence Match ( AT3G01280.1 )
(BLAST)

001: MVKGPGLYTE IGKKARDLLY KDHNSDQKFS ITTFSPAGVA ITSTGTKKGD LLLGDVAFQS RRKNITTDLK VCTDSTFLIT ATVDEAAPGL RSIFSFKVPD
101: QNSGKVELQY LHEYAGISTS MGLTQNPTVN FSGVIGSNVL AVGTDVSFDT KSGNFTKINA GLSFTKEDLI ASLTVNDKGD LLNASYYHIV NPLFNTAVGA
201: EVSHKLSSKD STITVGTQHS LDPLTSVKAR VNSAGIASAL IQHEWKPKSF FTISGEVDTK SIDKSAKVGL ALALKP

Arabidopsis Description

VDAC1Mitochondrial outer membrane protein porin 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRH5]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.