CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH03426	Soybean	cytosol	95.51	95.51
KRH63406	Soybean	cytosol	58.37	57.66
KRH54504	Soybean	cytosol	56.73	56.05
GSMUA_Achr6P04840_001	Banana	cytosol	44.08	39.56
VIT_17s0000g05690.t01	Wine grape	cytosol, mitochondrion	41.63	39.53
GSMUA_Achr7P23900_001	Banana	cytosol, unclear	44.08	39.27
KRH18503	Soybean	mitochondrion	43.67	38.77
KRH45848	Soybean	mitochondrion	43.67	38.77
KRG93501	Soybean	endoplasmic reticulum, mitochondrion	43.67	38.77
KRG99160	Soybean	mitochondrion	43.67	38.77
GSMUA_Achr7P08830_001	Banana	cytosol	43.27	38.55
PGSC0003DMT400065213	Potato	cytosol	37.55	38.49
Solyc03g113210.2.1	Tomato	cytosol	36.73	38.14
TraesCS5A01G193700.1	Wheat	golgi, unclear	42.45	37.82
Os01t0715500-00	Rice	cytosol, mitochondrion, plasma membrane	32.24	37.8
TraesCS5B01G189000.1	Wheat	mitochondrion	42.04	37.45
TraesCS5D01G196100.1	Wheat	mitochondrion	42.04	37.45
KRH01127	Soybean	mitochondrion	42.04	37.32
GSMUA_Achr3P20500_001	Banana	cytosol	41.22	36.73
EER96631	Sorghum	cytosol	41.22	36.59
KRH40133	Soybean	mitochondrion	41.22	36.59
GSMUA_Achr7P00060_001	Banana	cytosol	40.82	36.36
Zm00001d044318_P001	Maize	cytosol, mitochondrion	40.41	36.0
EES03185	Sorghum	cytosol	39.59	35.27
Zm00001d020219_P004	Maize	cytosol	39.59	35.14
Os01t0588200-01	Rice	mitochondrion, plasma membrane	39.18	34.91
HORVU5Hr1G124370.1	Barley	cytosol, mitochondrion, plastid	14.29	34.65
TraesCS3A01G210600.1	Wheat	cytosol, mitochondrion, nucleus, plastid	38.37	34.18
Zm00001d038840_P001	Maize	mitochondrion	38.37	34.06
EES18574	Sorghum	cytosol	38.37	34.06
EES03523	Sorghum	cytosol	38.37	33.94
Os05t0536200-01	Rice	mitochondrion	38.78	33.93
TraesCS3D01G213400.1	Wheat	cytosol	37.96	33.82
TraesCS3B01G241200.1	Wheat	cytosol, golgi, unclear	37.96	33.82
HORVU3Hr1G013220.1	Barley	cytosol	13.88	33.66
HORVU3Hr1G051010.2	Barley	cytosol, plasma membrane	37.55	33.45
Zm00001d011135_P001	Maize	cytosol, mitochondrion, nucleus	37.14	32.85
TraesCS1B01G374200.1	Wheat	golgi, unclear	38.37	32.64
TraesCS1D01G361900.1	Wheat	golgi	37.14	31.6
Zm00001d011242_P002	Maize	cytosol	38.37	31.02
Zm00001d043661_P001	Maize	cytosol	33.88	29.96
KRH77123	Soybean	endoplasmic reticulum, mitochondrion	33.06	29.35
KRH28358	Soybean	mitochondrion	32.24	28.62
TraesCS3B01G276600.1	Wheat	cytosol, plasma membrane, plastid	33.06	28.32
AT5G37610.1	Thale cress	endoplasmic reticulum, extracellular	18.37	27.61
HORVU1Hr1G080370.2	Barley	plastid	37.14	27.58
KRH19015	Soybean	cytosol	30.2	26.71
KRH02881	Soybean	mitochondrion	30.2	26.71
TraesCS3D01G247900.1	Wheat	cytosol	34.29	26.09
KRH15450	Soybean	cytosol	29.39	25.99
TraesCS3A01G247900.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	33.06	24.47
Zm00001d005649_P001	Maize	cytosol	10.61	24.07
HORVU3Hr1G067610.2	Barley	mitochondrion	31.84	22.48
TraesCS7D01G167200.1	Wheat	mitochondrion	24.9	22.43
KRH05595	Soybean	plastid	22.86	22.31
CDY01000	Canola	endoplasmic reticulum, plasma membrane	23.67	16.07
CDY39954	Canola	extracellular	13.88	16.04
TraesCS7A01G166600.1	Wheat	cytosol	28.57	13.57
HORVU7Hr1G034770.11	Barley	plastid	29.8	10.6

Protein Annotations

EntrezGene:100787061	Gene3D:2.40.160.10	MapMan:24.4.1	EMBL:ACUP02002803	EnsemblPlantsGene:GLYMA_05G029700	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005741	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0055085	InterPro:IPR023614	UniProt:K7KML2	EnsemblPlants:KRH56957
ProteinID:KRH56957	ProteinID:KRH56957.1	PFAM:PF01459	PANTHER:PTHR11743	PANTHER:PTHR11743:SF35	InterPro:Porin_Euk/Tom40
InterPro:Porin_dom_sf	UniParc:UPI00023399D0	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:2547452..2549487

Molecular Weight (calculated)

26546.8 Da

IEP (calculated)

6.410

GRAVY (calculated)

0.019

Length

245 amino acids

Sequence
(BLAST)

001: MSTCPGIYFD IGKKAKDVLH KDYSNLSPIH FHYQFMDYNV DLSCKVDELV PGFKSLFKCT IPDSGKVELQ HLSNYTGITG CIGLEGNLEK GYDPVLNLSG
101: LVGTNILSLG GNVALDLPTR TISKLNAGLG LNTDFLVASL TMHDSFDIVK ASCYHEVNPL TKTAIAAELN HSLSMGETSA TVGAQHAFLP QTLVKARFDT
201: FGRAGALIQQ GFWERCFVTM AGEVEFNTSD NNLHPKVGVS VALKP

Best Arabidopsis Sequence Match ( AT3G01280.1 )
(BLAST)

001: MVKGPGLYTE IGKKARDLLY KDHNSDQKFS ITTFSPAGVA ITSTGTKKGD LLLGDVAFQS RRKNITTDLK VCTDSTFLIT ATVDEAAPGL RSIFSFKVPD
101: QNSGKVELQY LHEYAGISTS MGLTQNPTVN FSGVIGSNVL AVGTDVSFDT KSGNFTKINA GLSFTKEDLI ASLTVNDKGD LLNASYYHIV NPLFNTAVGA
201: EVSHKLSSKD STITVGTQHS LDPLTSVKAR VNSAGIASAL IQHEWKPKSF FTISGEVDTK SIDKSAKVGL ALALKP

Arabidopsis Description

VDAC1Mitochondrial outer membrane protein porin 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRH5]
SUBAcon: [cytosol,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.