CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH15450	Soybean	cytosol	85.26	77.26
KRH28358	Soybean	mitochondrion	55.38	50.36
KRH77123	Soybean	endoplasmic reticulum, mitochondrion	54.98	50.0
Zm00001d028102_P001	Maize	mitochondrion	54.58	49.82
Os03t0202200-01	Rice	mitochondrion, nucleus, plasma membrane, plastid	54.58	49.46
Zm00001d048149_P002	Maize	mitochondrion	53.39	48.73
EER92681	Sorghum	mitochondrion	53.39	48.73
TraesCS4D01G258900.1	Wheat	cytosol	52.59	48.0
TraesCS4B01G259600.1	Wheat	cytosol	52.59	47.65
HORVU4Hr1G070150.3	Barley	plasma membrane	52.59	47.65
TraesCS4A01G046000.1	Wheat	plastid	52.59	47.65
GSMUA_AchrUn_...	Banana	cytosol	51.39	46.91
GSMUA_Achr7P26190_001	Banana	cytosol	51.0	46.55
GSMUA_Achr5P08710_001	Banana	cytosol	49.0	44.73
KRH18503	Soybean	mitochondrion	44.62	40.58
KRG93501	Soybean	endoplasmic reticulum, mitochondrion	43.82	39.86
KRH40133	Soybean	mitochondrion	43.03	39.13
KRH01127	Soybean	mitochondrion	42.63	38.77
VIT_18s0001g09120.t01	Wine grape	mitochondrion	12.75	38.1
KRG99160	Soybean	mitochondrion	40.64	36.96
KRH45848	Soybean	mitochondrion	40.64	36.96
KRH02881	Soybean	mitochondrion	36.65	33.21
KRH19015	Soybean	cytosol	36.26	32.85
KRH63406	Soybean	cytosol	22.71	22.98
KRH56957	Soybean	cytosol	22.31	22.86
KRH03426	Soybean	cytosol	21.91	22.45
KRH54504	Soybean	cytosol	21.51	21.77

Protein Annotations

Gene3D:2.40.160.10	MapMan:24.4.1	UniProt:A0A0R0FS37	EMBL:ACUP02010760	EnsemblPlantsGene:GLYMA_17G235700	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005741	GO:GO:0006810	GO:GO:0008150	GO:GO:0008308	GO:GO:0015698	GO:GO:0016020
GO:GO:0055085	GO:GO:0098656	InterPro:IPR023614	EnsemblPlants:KRH05595	ProteinID:KRH05595	ProteinID:KRH05595.1
PFAM:PF01459	ScanProsite:PS00558	PANTHER:PTHR11743	PANTHER:PTHR11743:SF32	InterPro:Porin_Euk	InterPro:Porin_Euk/Tom40
InterPro:Porin_dom_sf	UniParc:UPI0006ED4F40	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:+:39074435..39076492

Molecular Weight (calculated)

27339.8 Da

IEP (calculated)

10.404

GRAVY (calculated)

-0.244

Length

251 amino acids

Sequence
(BLAST)

001: MSGKGPGLFS AIGKIGRDIL MKDYNSDQRF TFSSSSTNSG LDLKSTLVKS RGLSSGDVAA AFKYKNKAVN VKVDTESNVL TTFTVSDVVP SVKTIALIRL
101: PDYNSGKVLR LSWDKRYTPL GLNRSPAIDF SGMMGTPSIV IGAQISFSTR MGKFTKYKGD KGDSMKVSYL YQLERLNGGA VVGEISRRFS TNENTLTVGC
201: LYVVDSQTAL KAKLNNHGNL GALLQHELTR KSFLTISSAF ETKDLDKSPK F

Best Arabidopsis Sequence Match ( AT3G01280.1 )
(BLAST)

001: MVKGPGLYTE IGKKARDLLY KDHNSDQKFS ITTFSPAGVA ITSTGTKKGD LLLGDVAFQS RRKNITTDLK VCTDSTFLIT ATVDEAAPGL RSIFSFKVPD
101: QNSGKVELQY LHEYAGISTS MGLTQNPTVN FSGVIGSNVL AVGTDVSFDT KSGNFTKINA GLSFTKEDLI ASLTVNDKGD LLNASYYHIV NPLFNTAVGA
201: EVSHKLSSKD STITVGTQHS LDPLTSVKAR VNSAGIASAL IQHEWKPKSF FTISGEVDTK SIDKSAKVGL ALALKP

Arabidopsis Description

VDAC1Mitochondrial outer membrane protein porin 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRH5]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.