Factsheet for HORVU1Hr1G080370.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
TargetP:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G361900.1	Wheat	golgi	81.21	93.06
TraesCS1B01G374200.1	Wheat	golgi, unclear	80.61	92.36
HORVU5Hr1G124370.1	Barley	cytosol, mitochondrion, plastid	27.88	91.09
HORVU3Hr1G013220.1	Barley	cytosol	27.27	89.11
Os05t0536200-01	Rice	mitochondrion	60.61	71.43
Zm00001d038840_P001	Maize	mitochondrion	57.58	68.84
EES18574	Sorghum	cytosol	56.36	67.39
GSMUA_Achr7P23900_001	Banana	cytosol, unclear	52.12	62.55
GSMUA_Achr7P00060_001	Banana	cytosol	51.82	62.18
GSMUA_Achr3P20500_001	Banana	cytosol	50.61	60.73
HORVU3Hr1G051010.2	Barley	cytosol, plasma membrane	50.3	60.36
Zm00001d011135_P001	Maize	cytosol, mitochondrion, nucleus	50.3	59.93
HORVU3Hr1G067610.2	Barley	mitochondrion	51.52	48.99
HORVU4Hr1G070150.3	Barley	plasma membrane	37.58	44.77
KRH03426	Soybean	cytosol	28.18	37.96
VIT_17s0000g05690.t01	Wine grape	cytosol, mitochondrion	29.39	37.6
KRH56957	Soybean	cytosol	27.58	37.14
KRH63406	Soybean	cytosol	27.58	36.69
KRH54504	Soybean	cytosol	26.36	35.08
Solyc03g113210.2.1	Tomato	cytosol	23.33	32.63
PGSC0003DMT400065213	Potato	cytosol	23.03	31.8
AT5G37610.1	Thale cress	endoplasmic reticulum, extracellular	14.24	28.83
CDY39954	Canola	extracellular	13.03	20.28
CDY01000	Canola	endoplasmic reticulum, plasma membrane	20.0	18.28
HORVU7Hr1G034770.11	Barley	plastid	30.3	14.51

Protein Annotations

EnsemblPlants:HORVU1Hr1G080370.2	EnsemblPlantsGene:HORVU1Hr1G080370	Gene3D:2.40.160.10	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005741	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0055085	InterPro:IPR023614	InterPro:Porin_Euk/Tom40	InterPro:Porin_dom_sf	PANTHER:PTHR11743	PANTHER:PTHR11743:SF34
PFAM:PF01459	SEG:seg	UniParc:UPI000B479F58	UniProt:A0A287GFQ6	MapMan:24.4.1	:

Description

No Description!

Coordinates

chrchr1H:+:525281648..525284902

Molecular Weight (calculated)

35176.0 Da

IEP (calculated)

10.591

GRAVY (calculated)

-0.345

Length

330 amino acids

Sequence
(BLAST)

001: ALRPIHPSLP PTRSPPPKSH SSPRRGTPRR RRRRRPPLAM DAPKPTPAAA PAGAAGPGLY ADIGKKARAD LLNRDYTTGQ KFTFTTTAAN GATITSSSTK
101: KNEAILSDLQ TQVKIKNFTV DVKATSDSSV VTTITIPELC KPGLKGVLSL PFPYQKSTPG KAELQYLHPH LGINGSVGLN PNPLVNISGV IGTKALAFGL
201: DVAFDTASGD FTKYNAGMSH TNQDLTASLM LNNKGNTLAA SYYHQVQLTT AVGAEIAHSF SSNENTITVG TQHELDPLTT LKGRYNNFGI ASALIQHAWR
301: PKSVITFSTE VDTKAVEKSP KFGLALSLKP

Best Arabidopsis Sequence Match ( AT5G15090.1 )
(BLAST)

001: MVKGPGLYTE IGKKARDLLY RDYQGDQKFS VTTYSSTGVA ITTTGTNKGS LFLGDVATQV KNNNFTADVK VSTDSSLLTT LTFDEPAPGL KVIVQAKLPD
101: HKSGKAEVQY FHDYAGISTS VGFTATPIVN FSGVVGTNGL SLGTDVAYNT ESGNFKHFNA GFNFTKDDLT ASLILNDKGE KLNASYYQIV SPSTVVGAEI
201: SHNFTTKENA ITVGTQHALD PLTTVKARVN NAGVANALIQ HEWRPKSFFT VSGEVDSKAI DKSAKVGIAL ALKP

Arabidopsis Description

VDAC3Mitochondrial outer membrane protein porin 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SMX3]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.