Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G124370.1 | Barley | cytosol, mitochondrion, plastid | 15.95 | 25.74 |
| HORVU3Hr1G013220.1 | Barley | cytosol | 15.95 | 25.74 |
| Os01t0715500-00 | Rice | cytosol, mitochondrion, plasma membrane | 29.45 | 22.97 |
| AT3G01280.1 | Thale cress | cytosol, mitochondrion | 34.97 | 20.65 |
| EES03523 | Sorghum | cytosol | 32.52 | 19.13 |
| KRH03426 | Soybean | cytosol | 28.22 | 18.78 |
| AT5G15090.2 | Thale cress | cytosol, mitochondrion | 31.29 | 18.61 |
| GSMUA_Achr7P08830_001 | Banana | cytosol | 31.29 | 18.55 |
| KRH56957 | Soybean | cytosol | 27.61 | 18.37 |
| Os05t0536200-01 | Rice | mitochondrion | 31.29 | 18.21 |
| TraesCS5B01G189000.1 | Wheat | mitochondrion | 30.67 | 18.18 |
| TraesCS3A01G210600.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 30.67 | 18.18 |
| TraesCS5A01G193700.1 | Wheat | golgi, unclear | 30.67 | 18.18 |
| TraesCS5D01G196100.1 | Wheat | mitochondrion | 30.67 | 18.18 |
| GSMUA_Achr7P00060_001 | Banana | cytosol | 30.67 | 18.18 |
| GSMUA_Achr6P04840_001 | Banana | cytosol | 30.06 | 17.95 |
| TraesCS3B01G241200.1 | Wheat | cytosol, golgi, unclear | 30.06 | 17.82 |
| Os01t0588200-01 | Rice | mitochondrion, plasma membrane | 30.06 | 17.82 |
| Zm00001d020219_P004 | Maize | cytosol | 30.06 | 17.75 |
| Zm00001d043661_P001 | Maize | cytosol | 30.06 | 17.69 |
| HORVU3Hr1G051010.2 | Barley | cytosol, plasma membrane | 29.45 | 17.45 |
| TraesCS3D01G213400.1 | Wheat | cytosol | 29.45 | 17.45 |
| EER96631 | Sorghum | cytosol | 29.45 | 17.39 |
| EES18574 | Sorghum | cytosol | 29.45 | 17.39 |
| Zm00001d038840_P001 | Maize | mitochondrion | 29.45 | 17.39 |
| TraesCS1D01G361900.1 | Wheat | golgi | 30.67 | 17.36 |
| KRH54504 | Soybean | cytosol | 26.38 | 17.34 |
| Zm00001d011135_P001 | Maize | cytosol, mitochondrion, nucleus | 29.45 | 17.33 |
| EES03185 | Sorghum | cytosol | 28.83 | 17.09 |
| GSMUA_Achr7P23900_001 | Banana | cytosol, unclear | 28.83 | 17.09 |
| TraesCS1B01G374200.1 | Wheat | golgi, unclear | 30.06 | 17.01 |
| KRH63406 | Soybean | cytosol | 25.77 | 16.94 |
| VIT_17s0000g05690.t01 | Wine grape | cytosol, mitochondrion | 26.38 | 16.67 |
| Zm00001d044318_P001 | Maize | cytosol, mitochondrion | 27.61 | 16.36 |
| GSMUA_Achr3P20500_001 | Banana | cytosol | 27.61 | 16.36 |
| Solyc03g113210.2.1 | Tomato | cytosol | 22.7 | 15.68 |
| Zm00001d011242_P002 | Maize | cytosol | 28.83 | 15.51 |
| PGSC0003DMT400065213 | Potato | cytosol | 22.09 | 15.06 |
| AT5G57490.1 | Thale cress | cytosol | 25.15 | 14.96 |
| TraesCS7D01G167200.1 | Wheat | mitochondrion | 24.54 | 14.71 |
| HORVU1Hr1G080370.2 | Barley | plastid | 28.83 | 14.24 |
| TraesCS3B01G276600.1 | Wheat | cytosol, plasma membrane, plastid | 24.54 | 13.99 |
| AT3G49920.1 | Thale cress | cytosol | 18.4 | 13.27 |
| TraesCS3D01G247900.1 | Wheat | cytosol | 25.77 | 13.04 |
| TraesCS3A01G247900.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 26.38 | 12.99 |
| CDY01000 | Canola | endoplasmic reticulum, plasma membrane | 27.61 | 12.47 |
| AT5G67500.1 | Thale cress | cytosol, mitochondrion, nucleus | 23.31 | 12.46 |
| HORVU3Hr1G067610.2 | Barley | mitochondrion | 24.54 | 11.53 |
| CDY39954 | Canola | extracellular | 14.72 | 11.32 |
| TraesCS7A01G166600.1 | Wheat | cytosol | 24.54 | 7.75 |
| HORVU7Hr1G034770.11 | Barley | plastid | 26.38 | 6.24 |
| Zm00001d005649_P001 | Maize | cytosol | 0.61 | 0.93 |
Protein Annotations
| Gene3D:2.40.160.10 | MapMan:24.4.1 | EntrezGene:833739 | ProteinID:AED94210.1 | ArrayExpress:AT5G37610 | EnsemblPlantsGene:AT5G37610 |
| RefSeq:AT5G37610 | TAIR:AT5G37610 | RefSeq:AT5G37610-TAIR-G | EnsemblPlants:AT5G37610.1 | TAIR:AT5G37610.1 | ProteinID:BAB08307.1 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005741 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0055085 | InterPro:IPR023614 | RefSeq:NP_198577.1 |
| PFAM:PF01459 | PANTHER:PTHR11743 | InterPro:Porin_Euk/Tom40 | InterPro:Porin_dom_sf | UniProt:Q9FHQ9 | UniParc:UPI00000A4DE7 |
Description
Putative mitochondrial outer membrane protein porin-like [Source:UniProtKB/Swiss-Prot;Acc:Q9FHQ9]
Coordinates
chr5:+:14938032..14938612
Molecular Weight (calculated)
18262.9 Da
IEP (calculated)
9.586
GRAVY (calculated)
0.107
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSERARIST IVGLFANPIL SFSAVFGNDF WRFGFELTLD LVNRIITKAN TVLSLITEDT TTTFSIDKKA SLFTASYYQR LHSKTVCGAE AKYILSDKSN
101: SFSIGKRHLF GDDDLIQALL SVSNGGSMRV LFQHHWTLKS FFTIAGERLL NHSSQRFGLA VEL
101: SFSIGKRHLF GDDDLIQALL SVSNGGSMRV LFQHHWTLKS FFTIAGERLL NHSSQRFGLA VEL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.