Factsheet for Bra031839.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43581	Canola	mitochondrion	98.44	98.44
Bra024444.1-P	Field mustard	cytosol, nucleus, plastid	96.88	22.46
Bra037844.1-P	Field mustard	cytosol, mitochondrion, nucleus	90.62	21.01
Bra012915.1-P	Field mustard	cytosol, mitochondrion, nucleus	82.81	19.2
VIT_07s0129g00170.t01	Wine grape	cytosol	79.69	18.48
KRH77123	Soybean	endoplasmic reticulum, mitochondrion	78.12	18.12
KRH28358	Soybean	mitochondrion	78.12	18.12
AT5G67500.1	Thale cress	cytosol, mitochondrion, nucleus	85.94	18.03
PGSC0003DMT400055247	Potato	cytosol	76.56	17.75
Solyc02g092440.2.1	Tomato	plastid	75.0	17.39
Solyc03g044010.2.1	Tomato	cytosol, nucleus, unclear	73.44	17.15
PGSC0003DMT400023484	Potato	cytosol	73.44	17.15
TraesCS4D01G258900.1	Wheat	cytosol	71.88	16.73
TraesCS4A01G046000.1	Wheat	plastid	71.88	16.61
TraesCS4B01G259600.1	Wheat	cytosol	71.88	16.61
EER92681	Sorghum	mitochondrion	70.31	16.36
Zm00001d028102_P001	Maize	mitochondrion	70.31	16.36
Zm00001d048149_P002	Maize	mitochondrion	70.31	16.36
HORVU4Hr1G070150.3	Barley	plasma membrane	70.31	16.25
GSMUA_AchrUn_...	Banana	cytosol	67.19	15.64
GSMUA_Achr5P08710_001	Banana	cytosol	67.19	15.64
Os03t0202200-01	Rice	mitochondrion, nucleus, plasma membrane, plastid	67.19	15.52
GSMUA_Achr7P26190_001	Banana	cytosol	62.5	14.55
Bra040507.1-P	Field mustard	cytosol	57.81	13.41
Bra006664.1-P	Field mustard	cytosol	57.81	13.41
Bra008723.1-P	Field mustard	cytosol	54.69	12.68
Bra001010.1-P	Field mustard	mitochondrion	51.56	11.96
Bra006817.1-P	Field mustard	cytosol	48.44	11.31
Bra039131.1-P	Field mustard	cytosol, golgi, mitochondrion	53.12	10.43
VIT_07s0129g00100.t01	Wine grape	cytosol	17.19	9.65
Bra002725.1-P	Field mustard	cytosol	17.19	6.92

Protein Annotations

Gene3D:2.40.160.10	MapMan:24.4.1	EnsemblPlantsGene:Bra031839	EnsemblPlants:Bra031839.1	EnsemblPlants:Bra031839.1-P	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005741	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0055085	InterPro:IPR023614	UniProt:M4ESQ9	PFAM:PF01459
PANTHER:PTHR11743	PANTHER:PTHR11743:SF29	InterPro:Porin_Euk/Tom40	InterPro:Porin_dom_sf	UniParc:UPI0002546AD7	:

Description

AT5G67500 (E=3e-025) VDAC2, ATVDAC2 | VDAC2 (VOLTAGE DEPENDENT ANION CHANNEL 2); voltage-gated anion channel

Coordinates

chrA02:-:27605747..27605941

Molecular Weight (calculated)

6803.3 Da

IEP (calculated)

10.405

GRAVY (calculated)

-0.153

Length

64 amino acids

Sequence
(BLAST)

1: MSKGPGLFAD HSTSVKAKLN NHGTLGALLQ HEVLPKSLVT VSSEIDTKAL DKHPRFGLSL ALKP

Best Arabidopsis Sequence Match ( AT5G67500.3 )
(BLAST)

001: MSKGPGLFTD IGKKAKDLLT RDYNSDQKFS ISTYSASGVA LTSTALKKGG VHAADVATQY KYKNALFDVK IDTDSSVLTT VTLTEILPST KAIASFKVPD
101: YNSAKLEVQY FHDHATVTAA AALKQNPLID ITATLGSPVI SFGAEAGYDT TSKTFTKYNA GISVTKPDAC LSIILGDKGD SLKASYLHHF DEFKRTAAVG
201: EVYRKFSTNE NTITVGGLYA IDHSTAVKAK LNNHGTLGAL LQHEVLPRSL VTVSSEIDTK ALEKHPRFGL SLALKP

Arabidopsis Description

VDAC2voltage dependent anion channel 2 [Source:TAIR;Acc:AT5G67500]
SUBAcon: [cytosol,nucleus,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.