Factsheet for Bra008723.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69321	Canola	cytosol	100.0	100.0
AT5G15090.2	Thale cress	cytosol, mitochondrion	77.9	78.47
Bra006664.1-P	Field mustard	cytosol	72.83	72.83
KRH18503	Soybean	mitochondrion	72.1	72.1
KRG93501	Soybean	endoplasmic reticulum, mitochondrion	71.74	71.74
Bra040507.1-P	Field mustard	cytosol	71.74	71.74
Bra001010.1-P	Field mustard	mitochondrion	71.38	71.38
PGSC0003DMT400005245	Potato	cytosol	71.38	71.38
KRH40133	Soybean	mitochondrion	71.38	71.38
KRH01127	Soybean	mitochondrion	71.38	71.38
PGSC0003DMT400017754	Potato	cytosol	69.93	69.93
Solyc02g067460.2.1	Tomato	plastid	69.93	69.93
VIT_14s0108g00010.t01	Wine grape	cytosol	69.2	69.2
Bra039131.1-P	Field mustard	cytosol, golgi, mitochondrion	71.38	60.43
Solyc03g058920.2.1	Tomato	plastid	71.01	57.99
Bra031839.1-P	Field mustard	mitochondrion	12.68	54.69
Bra006817.1-P	Field mustard	cytosol	47.83	48.18
Bra037844.1-P	Field mustard	cytosol, mitochondrion, nucleus	46.38	46.38
Bra024444.1-P	Field mustard	cytosol, nucleus, plastid	46.01	46.01
Bra012915.1-P	Field mustard	cytosol, mitochondrion, nucleus	44.93	44.93
Bra002725.1-P	Field mustard	cytosol	22.83	39.62

Protein Annotations

Gene3D:2.40.160.10	MapMan:24.4.1	ProteinID:AAS48868	ProteinID:AAS48868.1	EMBL:AY526084	EnsemblPlantsGene:Bra008723
EnsemblPlants:Bra008723.1	EnsemblPlants:Bra008723.1-P	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005618
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005730	GO:GO:0005737	GO:GO:0005739
GO:GO:0005741	GO:GO:0005773	GO:GO:0005774	GO:GO:0005886	GO:GO:0006091	GO:GO:0006810
GO:GO:0006950	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0008308	GO:GO:0009060
GO:GO:0009409	GO:GO:0009507	GO:GO:0009536	GO:GO:0009605	GO:GO:0009607	GO:GO:0009617
GO:GO:0009628	GO:GO:0009719	GO:GO:0009735	GO:GO:0009791	GO:GO:0009941	GO:GO:0009987
GO:GO:0010029	GO:GO:0015698	GO:GO:0016020	GO:GO:0030312	GO:GO:0042742	GO:GO:0055085
GO:GO:0098656	InterPro:IPR023614	PFAM:PF01459	ScanProsite:PS00558	PANTHER:PTHR11743	PANTHER:PTHR11743:SF31
InterPro:Porin_Euk	InterPro:Porin_Euk/Tom40	InterPro:Porin_dom_sf	UniProt:Q6QTH2	UniParc:UPI000025398F	:

Description

AT5G15090 (E=7e-124) VDAC3, ATVDAC3 | VDAC3 (VOLTAGE DEPENDENT ANION CHANNEL 3); voltage-gated anion channel

Coordinates

chrA10:+:13576513..13577982

Molecular Weight (calculated)

29368.9 Da

IEP (calculated)

9.167

GRAVY (calculated)

-0.126

Length

276 amino acids

Sequence
(BLAST)

001: MGKGPGLYTE IGKKARDLLY KDYQGDQKLS ITTYSSTGVA ITTSGTNKGD LFLGDVVTQI KNKNFTADIK VASDSSILTT FTYDEATPGL KAIVSAKVPD
101: QKSAKVELQY MHPHAGICTS VGLTANPVVN FSGVIGTSVL ALGTDVSFDT ESGNFKHFNT GVSFTKDDLI ASLTLNDKGE KLTASYYHIV NPLKNTVVGA
201: EVSHNLKSQV NSITVGTQHA LDPLTTVKAR VNNAGIANAL IQHEWRPKSF ITISGEVDSK AIEKSAKVGF ALALKP

Best Arabidopsis Sequence Match ( AT5G15090.1 )
(BLAST)

001: MVKGPGLYTE IGKKARDLLY RDYQGDQKFS VTTYSSTGVA ITTTGTNKGS LFLGDVATQV KNNNFTADVK VSTDSSLLTT LTFDEPAPGL KVIVQAKLPD
101: HKSGKAEVQY FHDYAGISTS VGFTATPIVN FSGVVGTNGL SLGTDVAYNT ESGNFKHFNA GFNFTKDDLT ASLILNDKGE KLNASYYQIV SPSTVVGAEI
201: SHNFTTKENA ITVGTQHALD PLTTVKARVN NAGVANALIQ HEWRPKSFFT VSGEVDSKAI DKSAKVGIAL ALKP

Arabidopsis Description

VDAC3Mitochondrial outer membrane protein porin 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SMX3]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.