Factsheet for TraesCS7D01G276300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G276400.1	Wheat	plastid	98.47	98.85
TraesCS1D01G306200.1	Wheat	plastid	91.19	90.49
TraesCS5D01G357600.1	Wheat	plastid	90.8	89.43
TraesCS5D01G464700.1	Wheat	plastid	90.8	89.1
TraesCS5D01G464900.1	Wheat	plastid	90.42	88.72
TraesCS1D01G411600.1	Wheat	plastid	90.42	88.72
TraesCS1D01G374900.1	Wheat	plastid	90.04	88.68
TraesCS5D01G464800.1	Wheat	plastid	90.04	88.35
TraesCS1D01G411300.1	Wheat	plastid	90.04	88.35
TraesCS6D01G088800.1	Wheat	plastid	90.04	88.35
TraesCS7D01G199400.1	Wheat	plastid	89.66	87.97
TraesCS1D01G375100.1	Wheat	plastid	89.27	87.92
TraesCS1D01G375000.1	Wheat	plastid	79.69	87.03
TraesCS6D01G088600.1	Wheat	plastid	88.12	86.47
TraesCS7D01G199500.1	Wheat	plastid	87.36	85.71
TraesCS6D01G088700.1	Wheat	plastid	74.71	84.78
HORVU7Hr1G058120.1	Barley	plastid	96.55	75.9
TraesCS5D01G329200.1	Wheat	plastid	75.48	74.9
TraesCS1D01G428200.1	Wheat	plastid	70.11	68.28
TraesCS1D01G375200.1	Wheat	plastid	40.23	68.18
TraesCS4D01G086400.1	Wheat	plastid	45.98	41.96
TraesCS5D01G182000.1	Wheat	plastid	44.06	37.1
TraesCS7D01G227300.1	Wheat	plastid	33.72	35.92
TraesCS6D01G299200.1	Wheat	plastid	33.72	34.65
TraesCS2D01G200700.1	Wheat	plastid	33.72	34.51
TraesCS5D01G219100.1	Wheat	plastid	32.95	31.27
TraesCS6D01G152700.1	Wheat	golgi	32.18	31.23
TraesCS5D01G238300.1	Wheat	mitochondrion, plastid	28.74	30.61
TraesCS2D01G209900.1	Wheat	plastid	33.33	30.42
TraesCS2D01G320900.1	Wheat	plastid	28.35	29.02

Protein Annotations

EnsemblPlants:TraesCS7D01G276300.1	EnsemblPlantsGene:TraesCS7D01G276300	Gene3D:1.10.3460.10	GO:GO:0005575	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0009765	GO:GO:0009987	GO:GO:0015979	GO:GO:0016020	InterPro:Chloro_AB-bd_pln
InterPro:Chloroa_b-bind	InterPro:Chlorophyll_a/b-bd_dom_sf	InterPro:IPR023329	PANTHER:PTHR21649	PANTHER:PTHR21649:SF25	PFAM:PF00504
SEG:seg	SUPFAM:SSF103511	MapMan:1.1.1.1.1	:	:	:

Description

No Description!

Coordinates

chr7D:+:264752752..264753590

Molecular Weight (calculated)

27551.0 Da

IEP (calculated)

4.882

GRAVY (calculated)

0.094

Length

261 amino acids

Sequence
(BLAST)

001: MAATTTMALS SPAIKLAGAS YALGGGGRIT MRKAAPKASA SNSPWYGPDR VLYLGPLSGE PPSYLSGEFP GDYGWDTAGL SADPETFAKN RELEVIHCRW
101: AMLGALGCVF PELLARNGVK FGEAVWFKAG SQIFSEGGLD YLGNPSLVHA QSILAIWACQ VVLMGAVEGY RVAGGPLGEI VDPLYPGGSF DPLGLADDPE
201: AFAELKVKEI KNGRLAMFSM FGYFVQAIVT GKGPLENLAD HLADPVNNNA WAFATNFVPG K

Best Arabidopsis Sequence Match ( AT1G29910.1 )
(BLAST)

001: MAASTMALSS PAFAGKAVNL SPAASEVLGS GRVTMRKTVA KPKGPSGSPW YGSDRVKYLG PFSGESPSYL TGEFPGDYGW DTAGLSADPE TFARNRELEV
101: IHSRWAMLGA LGCVFPELLA RNGVKFGEAV WFKAGSQIFS DGGLDYLGNP SLVHAQSILA IWATQVILMG AVEGYRVAGN GPLGEAEDLL YPGGSFDPLG
201: LATDPEAFAE LKVKELKNGR LAMFSMFGFF VQAIVTGKGP IENLADHLAD PVNNNAWAFA TNFVPGK

Arabidopsis Description

LHCB1.1Chlorophyll a-b binding protein 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ87]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.