Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G227900.1 | Wheat | plastid | 99.59 | 99.59 |
| TraesCS5A01G229300.1 | Wheat | mitochondrion, plastid | 99.59 | 99.59 |
| HORVU5Hr1G066280.1 | Barley | plastid | 99.18 | 99.18 |
| Zm00001d050403_P001 | Maize | plastid | 84.08 | 84.43 |
| Zm00001d032197_P001 | Maize | plastid | 84.9 | 84.21 |
| KXG25214 | Sorghum | plastid | 84.9 | 82.87 |
| Os08t0435900-01 | Rice | mitochondrion | 81.63 | 81.97 |
| GSMUA_Achr4P24090_001 | Banana | unclear | 77.55 | 75.4 |
| GSMUA_Achr2P14960_001 | Banana | plastid | 76.33 | 74.5 |
| KRH54568 | Soybean | nucleus, plastid | 76.33 | 74.21 |
| KRH63318 | Soybean | plastid | 75.92 | 73.81 |
| Bra018144.1-P | Field mustard | plastid | 75.51 | 73.41 |
| CDX99044 | Canola | plastid | 75.51 | 73.41 |
| CDY47410 | Canola | plastid | 75.51 | 73.41 |
| AT3G47470.1 | Thale cress | plastid | 75.1 | 73.31 |
| Solyc06g069730.2.1 | Tomato | plastid | 74.69 | 73.2 |
| VIT_17s0000g06350.t01 | Wine grape | plastid | 75.1 | 73.02 |
| PGSC0003DMT400050232 | Potato | plastid | 74.69 | 72.91 |
| PGSC0003DMT400083158 | Potato | plastid | 74.29 | 72.8 |
| Solyc03g115900.2.1 | Tomato | plastid | 74.29 | 72.51 |
| TraesCS2D01G200700.1 | Wheat | plastid | 47.35 | 45.49 |
| TraesCS6D01G299200.1 | Wheat | plastid | 43.27 | 41.73 |
| TraesCS5D01G219100.1 | Wheat | plastid | 43.67 | 38.91 |
| TraesCS7D01G227300.1 | Wheat | plastid | 38.37 | 38.37 |
| TraesCS6D01G152700.1 | Wheat | golgi | 39.59 | 36.06 |
| TraesCS2D01G320900.1 | Wheat | plastid | 32.65 | 31.37 |
| TraesCS2D01G209900.1 | Wheat | plastid | 35.92 | 30.77 |
| TraesCS6D01G088700.1 | Wheat | plastid | 28.16 | 30.0 |
| TraesCS1D01G428200.1 | Wheat | plastid | 32.24 | 29.48 |
| TraesCS5D01G357600.1 | Wheat | plastid | 31.84 | 29.43 |
| TraesCS5D01G464900.1 | Wheat | plastid | 31.43 | 28.95 |
| TraesCS5D01G329200.1 | Wheat | plastid | 31.02 | 28.9 |
| TraesCS1D01G306200.1 | Wheat | plastid | 31.02 | 28.9 |
| TraesCS7D01G276300.1 | Wheat | plastid | 30.61 | 28.74 |
| TraesCS5D01G464700.1 | Wheat | plastid | 31.02 | 28.57 |
| TraesCS1D01G375100.1 | Wheat | plastid | 30.61 | 28.3 |
| TraesCS1D01G374900.1 | Wheat | plastid | 30.61 | 28.3 |
| TraesCS1D01G411600.1 | Wheat | plastid | 30.61 | 28.2 |
| TraesCS6D01G088600.1 | Wheat | plastid | 30.61 | 28.2 |
| TraesCS1D01G411300.1 | Wheat | plastid | 30.61 | 28.2 |
| TraesCS7D01G199400.1 | Wheat | plastid | 30.2 | 27.82 |
| TraesCS6D01G088800.1 | Wheat | plastid | 29.8 | 27.44 |
| TraesCS5D01G464800.1 | Wheat | plastid | 29.8 | 27.44 |
| TraesCS7D01G199500.1 | Wheat | plastid | 29.39 | 27.07 |
| TraesCS4D01G086400.1 | Wheat | plastid | 31.43 | 26.92 |
| TraesCS1D01G375000.1 | Wheat | plastid | 26.12 | 26.78 |
| TraesCS5D01G182000.1 | Wheat | plastid | 27.76 | 21.94 |
| TraesCS1D01G375200.1 | Wheat | plastid | 12.65 | 20.13 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G238300.1 | EnsemblPlantsGene:TraesCS5D01G238300 | Gene3D:1.10.3460.10 | GO:GO:0005575 | GO:GO:0006091 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009765 | GO:GO:0009987 | GO:GO:0015979 | GO:GO:0016020 | InterPro:Chloro_AB-bd_pln |
| InterPro:Chloroa_b-bind | InterPro:Chlorophyll_a/b-bd_dom_sf | InterPro:IPR023329 | PANTHER:PTHR21649 | PANTHER:PTHR21649:SF4 | PFAM:PF00504 |
| SEG:seg | SUPFAM:SSF103511 | MapMan:1.1.4.1.4 | : | : | : |
Description
No Description!
Coordinates
chr5D:+:346636778..346637762
Molecular Weight (calculated)
26696.8 Da
IEP (calculated)
6.017
GRAVY (calculated)
-0.102
Length
245 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSVSARAPV AALRPAASAS SPRFLGDSGR VGLAKSTRRD VAVQAKGSWL PGLPSPAYLD GSLAGDNGFD PLALAEDPED LRWFVQAELV NGRWAMLGVA
101: GMLIPEVLTK AGLLNAPEWY DAGKETYFAS SSTLFVIEFI LFHYVEIRRW QDIKNPGSVN QDPIFKSYSL PPHECGYPGS VFNPLNFAPT LENKEKELAN
201: GRLAMLAFLG FLVQHNVTGK GPFENLQQHL ADPWHTTIIQ TISGQ
101: GMLIPEVLTK AGLLNAPEWY DAGKETYFAS SSTLFVIEFI LFHYVEIRRW QDIKNPGSVN QDPIFKSYSL PPHECGYPGS VFNPLNFAPT LENKEKELAN
201: GRLAMLAFLG FLVQHNVTGK GPFENLQQHL ADPWHTTIIQ TISGQ
001: MATVTTHASA SIFRPCTSKP RFLTGSSGRL NRDLSFTSIG SSAKTSSFKV EAKKGEWLPG LASPDYLTGS LAGDNGFDPL GLAEDPENLK WFVQAELVNG
101: RWAMLGVAGM LLPEVFTKIG IINVPEWYDA GKEQYFASSS TLFVIEFILF HYVEIRRWQD IKNPGSVNQD PIFKQYSLPK GEVGYPGGIF NPLNFAPTQE
201: AKEKELANGR LAMLAFLGFV VQHNVTGKGP FENLLQHLSD PWHNTIVQTF N
101: RWAMLGVAGM LLPEVFTKIG IINVPEWYDA GKEQYFASSS TLFVIEFILF HYVEIRRWQD IKNPGSVNQD PIFKQYSLPK GEVGYPGGIF NPLNFAPTQE
201: AKEKELANGR LAMLAFLGFV VQHNVTGKGP FENLLQHLSD PWHNTIVQTF N
Arabidopsis Description
LHCA4Chlorophyll a-b binding protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A178VEE6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.