Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 3
- endoplasmic reticulum 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G175000.1 | Wheat | plastid | 97.74 | 98.06 |
| TraesCS5A01G177700.1 | Wheat | plastid | 96.77 | 96.77 |
| HORVU5Hr1G054000.1 | Barley | mitochondrion, plastid | 95.81 | 95.81 |
| EER96508 | Sorghum | plastid | 86.45 | 85.35 |
| Zm00001d020002_P002 | Maize | plastid | 86.45 | 85.08 |
| Os09t0296800-01 | Rice | plastid | 88.06 | 85.05 |
| GSMUA_Achr9P27480_001 | Banana | mitochondrion | 70.97 | 68.32 |
| PGSC0003DMT400025715 | Potato | plastid | 70.0 | 68.24 |
| Bra008265.1-P | Field mustard | plastid | 70.97 | 67.9 |
| CDY45980 | Canola | plastid | 70.65 | 67.59 |
| VIT_18s0122g00430.t01 | Wine grape | plastid | 71.61 | 67.07 |
| CDY20401 | Canola | plastid | 70.32 | 66.67 |
| AT1G76570.1 | Thale cress | plastid | 69.03 | 65.44 |
| KRH06016 | Soybean | plastid | 70.0 | 65.36 |
| Solyc04g082920.2.1 | Tomato | plastid | 42.9 | 61.01 |
| KRH17548 | Soybean | cytosol, peroxisome, plastid | 33.87 | 51.98 |
| TraesCS1D01G306200.1 | Wheat | plastid | 37.74 | 44.49 |
| TraesCS7D01G276300.1 | Wheat | plastid | 37.1 | 44.06 |
| TraesCS5D01G357600.1 | Wheat | plastid | 37.42 | 43.77 |
| TraesCS1D01G411300.1 | Wheat | plastid | 37.1 | 43.23 |
| TraesCS5D01G464700.1 | Wheat | plastid | 37.1 | 43.23 |
| TraesCS1D01G374900.1 | Wheat | plastid | 36.77 | 43.02 |
| TraesCS7D01G199400.1 | Wheat | plastid | 36.77 | 42.86 |
| TraesCS5D01G464900.1 | Wheat | plastid | 36.77 | 42.86 |
| TraesCS1D01G375100.1 | Wheat | plastid | 36.45 | 42.64 |
| TraesCS6D01G088800.1 | Wheat | plastid | 36.45 | 42.48 |
| TraesCS1D01G375000.1 | Wheat | plastid | 32.26 | 41.84 |
| TraesCS5D01G464800.1 | Wheat | plastid | 35.81 | 41.73 |
| TraesCS6D01G088600.1 | Wheat | plastid | 35.81 | 41.73 |
| TraesCS1D01G411600.1 | Wheat | plastid | 35.81 | 41.73 |
| TraesCS7D01G199500.1 | Wheat | plastid | 35.48 | 41.35 |
| TraesCS5D01G329200.1 | Wheat | plastid | 34.84 | 41.06 |
| TraesCS1D01G428200.1 | Wheat | plastid | 35.48 | 41.04 |
| TraesCS6D01G088700.1 | Wheat | plastid | 30.32 | 40.87 |
| TraesCS7D01G227300.1 | Wheat | plastid | 30.97 | 39.18 |
| TraesCS1D01G375200.1 | Wheat | plastid | 17.74 | 35.71 |
| TraesCS4D01G086400.1 | Wheat | plastid | 32.9 | 35.66 |
| TraesCS2D01G200700.1 | Wheat | plastid | 27.42 | 33.33 |
| TraesCS6D01G299200.1 | Wheat | plastid | 27.1 | 33.07 |
| TraesCS2D01G209900.1 | Wheat | plastid | 27.1 | 29.37 |
| TraesCS6D01G152700.1 | Wheat | golgi | 25.48 | 29.37 |
| TraesCS5D01G219100.1 | Wheat | plastid | 25.48 | 28.73 |
| TraesCS5D01G238300.1 | Wheat | mitochondrion, plastid | 21.94 | 27.76 |
| TraesCS2D01G320900.1 | Wheat | plastid | 22.26 | 27.06 |
Protein Annotations
| MapMan:1.1.1.1.5 | Gene3D:1.10.3460.10 | InterPro:Chloro_AB-bd_pln | InterPro:Chloroa_b-bind | InterPro:Chlorophyll_a/b-bd_dom_sf | ncoils:Coil |
| GO:GO:0005575 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009628 | GO:GO:0009637 |
| GO:GO:0009765 | GO:GO:0009987 | GO:GO:0010218 | GO:GO:0015979 | GO:GO:0016020 | InterPro:IPR023329 |
| PFAM:PF00504 | PANTHER:PTHR21649 | PANTHER:PTHR21649:SF24 | SUPFAM:SSF103511 | EnsemblPlantsGene:TraesCS5D01G182000 | EnsemblPlants:TraesCS5D01G182000.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr5D:+:283008559..283011569
Molecular Weight (calculated)
33917.3 Da
IEP (calculated)
9.030
GRAVY (calculated)
0.142
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPLLLRSPA PPSAGVFCRR RKRMRARASW QELAGVLVFS AVPFTAVKAI ANSPLGASLR RRLESRKASA AAEADALRTA AREARSSSFW YGGARPRWLG
101: PLRYDYPEHL AGEYPGDYGF DIAGLGRDPV AFANYFNFEI LHCRWAMLAA LGVVVPELLD LFGIVHFVEP VWWKVGYAKL QGDTLDYLGI PGFRIAGGQG
201: IIVIAICQAL LMVGPEYARY CGIEALEPLG IYLPGDINYP GGALFDPLGL SKDPVAFEEL KVKEIKNGRL AMVAWIGFYA QAAVTGKGPV QNLIEHLSDP
301: LRNNVLSPFL
101: PLRYDYPEHL AGEYPGDYGF DIAGLGRDPV AFANYFNFEI LHCRWAMLAA LGVVVPELLD LFGIVHFVEP VWWKVGYAKL QGDTLDYLGI PGFRIAGGQG
201: IIVIAICQAL LMVGPEYARY CGIEALEPLG IYLPGDINYP GGALFDPLGL SKDPVAFEEL KVKEIKNGRL AMVAWIGFYA QAAVTGKGPV QNLIEHLSDP
301: LRNNVLSPFL
001: MALFQEKLSS LSSSYSSIHS LPRILVSKPR NRIAVTKSRS ICRASWQELA GVLVFSAIPF TAVKAIANSS IGVSLRRRLE EKKKEAVENS SRFKSKAQEA
101: RNDSKWYGKE RPRWFGPIPY DYPPYLTGEL PGDYGFDIAG LGKDRLTFDK YFNFEILHAR WAMLAALGAL IPEVFDLTGT FHFAEPVWWR VGYSKLQGET
201: LEYLGIPGLH VAGSQGVIVI AICQVLLMVG PEYARYCGIE ALEPLGIYLP GDINYPGGTL FDPLNLSEDP VAFEDLKVKE IKNGRLAMVA WLGFYAQAAF
301: TGKGPVQNLV DHVSDPLHNN LIAMLQT
101: RNDSKWYGKE RPRWFGPIPY DYPPYLTGEL PGDYGFDIAG LGKDRLTFDK YFNFEILHAR WAMLAALGAL IPEVFDLTGT FHFAEPVWWR VGYSKLQGET
201: LEYLGIPGLH VAGSQGVIVI AICQVLLMVG PEYARYCGIE ALEPLGIYLP GDINYPGGTL FDPLNLSEDP VAFEDLKVKE IKNGRLAMVA WLGFYAQAAF
301: TGKGPVQNLV DHVSDPLHNN LIAMLQT
Arabidopsis Description
LHCB7Chlorophyll a-b binding protein 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C9K1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.